Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3152 ATGGCACCCAGGAGGGCTGAGATGCTGCTAACCACGACCCTTGTGGTGGCTCTATGGGGAGTCACAGTGGCTCAGACTCAATCTAGCTGCACCACTGTGCTGATAAGTCTGTCTCCCTGCCTAGACTACATAACAGGAAACGCCTCTGCCCCGTCCTCTGGGTGTTGCTCACAACTTGCCTCTGTGGTGAGCTCACAGCCGCAGTGCTTGTGCGAGGTTGTGAATGGTGATGCCTCATCTGTTGGTCTCAACATTAATCAGACTCTGGCTTTGGCACTCCCCAGTGCCTGCCGAGTCCAGACACCTCCTGTTAGTATCTGTAAAGCTTCTTCTCCTACGGGTACTGCTGCTGCTGGAACAAGTAGTTTTCCTTCAGTGCGTATTGATTTGCTCAACTCACAAAACACACACAGCATTTTTGTTCCTCAGCCGTGGAAGTCCGGCCACATCCAATTCCCCTCACAAAAGCGACACCCTCTTTCTTCATCTTCTCCTACCGCTCGCTTCAACAAATCCTTGTTTATTAGCTTTGCCTTCGCTTTGAGGTGCTTTTTCCATTATATCACAAATTCAGTGCTTGAGAAGTAA 588 0.5 MAPRRAEMLLTTTLVVALWGVTVAQTQSSCTTVLISLSPCLDYITGNASAPSSGCCSQLASVVSSQPQCLCEVVNGDASSVGLNINQTLALALPSACRVQTPPVSICKASSPTGTAAAGTSSFPSVRIDLLNSQNTHSIFVPQPWKSGHIQFPSQKRHPLSSSSPTARFNKSLFISFAFALRCFFHYITNSVLEK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3152 195 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 27 106 - -
Glsi02g3152 195 Pfam Probable lipid transfer 22 107 IPR016140 -
Glsi02g3152 195 SMART aai_6 30 107 IPR016140 -
Glsi02g3152 195 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 29 108 IPR036312 -
Glsi02g3152 195 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 15 143 IPR043325 -
Glsi02g3152 195 CDD AAI_LTSS 37 99 - -
Glsi02g3152 195 Gene3D - 27 105 IPR036312 -
Glsi02g3152 195 PRINTS Plant phospholipid transfer protein signature 50 64 IPR000528 GO:0006869|GO:0008289
Glsi02g3152 195 PRINTS Plant phospholipid transfer protein signature 84 101 IPR000528 GO:0006869|GO:0008289
Glsi02g3152 195 PRINTS Plant phospholipid transfer protein signature 29 45 IPR000528 GO:0006869|GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3152 Glsi-ChrGlsi02 79984574 79990411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3152 5 108 Lipid Metabolism Gene Families AT3G22600 55.238 3.02e-35 120
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3152 02 79984574 79990411 Glsi02g3152 02 79984574 79990411 ECH