Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3088 ATGCAGAAAGATGAGAACAGCAAGCTCACCTTCACACAGATCCTTGTAGCCTCCTGTATTGGGTTGGTTTTCGCAGTAGCATTGCATTATTTTCTCAAAAAGATAAGAGATCAAAAGATCATTCCTCGTATAAGATTATCAAAAACAGGCCATGCCCCAAAGCTTGAAAGGTTCTCCCATTACGTAGCTAGGCAACTGGGGTTCAAAGATAGGAGAAATTGTCCACAACTATGTAAATTGGCTTCTGAATACATAAGGAAATGCGACGGATATGAAGAGGATATATACACGTACTTCGCAAGCGAACCAGACGCGGATTCACTTTTTGTGAAGCTTGTGGAGGAGTTTGAGAGATGCATTCTTAGTTACTTTGCATTCCATTGGACCCATGCTGATATAATGATCAGTCAGGTGTTTAGCTGCGAAACTGAACCAAAAAGAAAGCTCAAGCACATAGTTATGGCAGCAACTAGGGAGCAAAGGTTCGAGAGGGTAACCAAGAATCTGAAGGTGGCTAGAGTTTTTAATACATTAGTGGAAGAGATGAAAGCTATGGGACTCGCAGCAAATGATGACTCTCAATGTACCGAGGTGATGGCTCCAGTAGCTCACAGTGACAGGAGTCCAGTGCTCCTCCTGATGGGTGGTGGCATGGGAGCAGGGAAGAGCACCGTGCTTAAAGACATTCTCAAAGAACCTTTCTGGGCAGGAGCAGCAGGGAACGCTGTGGTGATTGAGGCAGATGCCTTCAAAGAATCAGATGTCATCTATAGGGCCCTTAGCTCTAGAGGGCATCACCATGACATGATCCGAACAGCTGAACTGGTACACCAATCATCTACCGATGCAGCCTCATCCCTGCTGGTAACAGCACTAAATGAAGGGCGGGATGTGATTATGGATGGAACTCTCTCCTGGGTTCCATTTGTTGTGCAGACAATAACTATGACCAGAATGGTCCACCGCCGCCGTTACCGCATGGGAGTTGGTTACAGGGTGGGTGAAGATGGAACTGTAACTGAAAACTATTGGGAACAAATTGAAGATGAAGAACCAGAACAAGTTGGAGGGAAAAAGAGAAAACCATATAGGATAGAGCTGGTTGGAGTAGTATGCGATGCTTACCTTGCAGTCGTTAGGGGAATAAGGAGAGCCATCATGTGTAGAAGAGCAGTAAGAGTAAAGTCACAATTGACATCCCACAAGAGATTTGCTGATGCATTTATGACTTACTGTAACCTAGTAGACAATGCACGACTATATTGCACAAATGCGTTGGAAGGCCCGCACAAGATGATAGGATGGAAAGAGAGTAACAAGACACTGCTCGTTGATCCAGATGAAATTGACTGTTTGAAGATGGTTGCTAGGTTGAATGAGAATGCCAACTCCATATATGAACTTTACAAGCACCCTAACCCCGCTTATGAAGCCGGATCTGTATGGAAAGACATTGTATTATCACCTTCAAGGTTGAACATCCAACAGGAGCTCAAGTATTCAATCCGAAAGGTTGAGAGATTGAATTTGAAAAGATAA 1539 0.4418 MQKDENSKLTFTQILVASCIGLVFAVALHYFLKKIRDQKIIPRIRLSKTGHAPKLERFSHYVARQLGFKDRRNCPQLCKLASEYIRKCDGYEEDIYTYFASEPDADSLFVKLVEEFERCILSYFAFHWTHADIMISQVFSCETEPKRKLKHIVMAATREQRFERVTKNLKVARVFNTLVEEMKAMGLAANDDSQCTEVMAPVAHSDRSPVLLLMGGGMGAGKSTVLKDILKEPFWAGAAGNAVVIEADAFKESDVIYRALSSRGHHHDMIRTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMTRMVHRRRYRMGVGYRVGEDGTVTENYWEQIEDEEPEQVGGKKRKPYRIELVGVVCDAYLAVVRGIRRAIMCRRAVRVKSQLTSHKRFADAFMTYCNLVDNARLYCTNALEGPHKMIGWKESNKTLLVDPDEIDCLKMVARLNENANSIYELYKHPNPAYEAGSVWKDIVLSPSRLNIQQELKYSIRKVERLNLKR 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3088 512 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Glsi02g3088 512 Gene3D - 189 441 IPR027417 -
Glsi02g3088 512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 319 IPR027417 -
Glsi02g3088 512 PANTHER UNCHARACTERIZED 3 510 IPR044802 -
Glsi02g3088 512 Pfam Zeta toxin 203 306 IPR010488 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3088 Glsi-ChrGlsi02 79437894 79442058 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3088 02 79437894 79442058 Glsi02g3088 02 79437894 79442058 ECH