Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3080 ATGATCGAATCTGCTCAACGACCTTCACCGCCATCCACTCTACCCGCCATTGATCAAACTCTGACCTTAATTCCTGGCCTTCCCATCGACGTTGCAGCCTTCATCCTCTCCTTCATCCCCTACTCCCACCATGCTCGCCTCAAACCCACCTGCAAATCATGGAACCTTTTCCTCTCTTCCAAAACTTTCATTTCTCTCCGTCGTCACCATCGTCACCTCTCTCCCCTTCTCTGTATCTTTCCCCAAGACCCTTCCCTAGCTTCCCCTTTCCTCTTTGACCCCAATTCTCTTGCTTGGTGCCCTCTCCCTCTTATGCCCTGTAACCCACATGTCTATGGCCTCTGTAACTTCGCCTCTATTTCAATTGGGCCTCACCTCTATGTTCTCGGAGGGTCCCTTTTCGACACCCGATCATTTCCTATTGATCGTCCCTCCCCGACTTCCTCAACTTTCCGTTTCAATTTCCATGATTTCTCATGGGAACGCCTTGCCCCCATGCTCTCAGCGCGTGGCAGCTTCGCCTGTGCGGCCGTGCCTGATTCCGACCAGATTTTGGTGGCTGGCGGTGGGTCGAGACATACCATGTTCGCCGCCGCTGGTAGCCGAATACGTTCCGTGGAGAGGTACGATATTGGGAAGGACGAGTGGGTTGCGATGGATGGGTTACCGAACTATCGAGCGGGATGCGTTGGTTTTTTAGTTGGCAACCGAAAGGAGGATAGGAAGGAGTTCTGGGTGATGGGTGGATATGGTGCTTCCAGGACCATTTCGGGGGTTTTCCCTGTGGATGAGTATTATAGGGATGCGGTGGTGATGGAATTCAACAATGGAGTTGGTGATGGGAAGTGGAGAGAGGTTGGGGATATGTGGGGTGAAGGGGAGAGGATGAGGCTTGGAAAGATTGGTGTGGTTGAGAACGAGGACCAAAGCTGTCCCGGGGTTTTCATGCTCGACGGGAATGAGATTTTGAGATATGACATGTCTTTGAATCGTTGGCTATACGAATCTCGTGTACCAAGAAAAGCTCCATATAAGTCATCATTTGGTTTTGTAGTATTAGATGGGGAATTGTATGTAATGAGACATTCAAGGGTAGCTGATATGACAGAGACACGGAGATGCAGACACCATAAGAGGGCAGCGACTCTGTACATTCAAATCTATCACCCGAAAAAGAAGAAGTGGAGATCTATGTTCACCAAGTTGCCCTTCAGTTACCCTATAGATATTAATAGTGCTGTACTGAGCTCAATTTGTCTCTGA 1263 0.4964 MIESAQRPSPPSTLPAIDQTLTLIPGLPIDVAAFILSFIPYSHHARLKPTCKSWNLFLSSKTFISLRRHHRHLSPLLCIFPQDPSLASPFLFDPNSLAWCPLPLMPCNPHVYGLCNFASISIGPHLYVLGGSLFDTRSFPIDRPSPTSSTFRFNFHDFSWERLAPMLSARGSFACAAVPDSDQILVAGGGSRHTMFAAAGSRIRSVERYDIGKDEWVAMDGLPNYRAGCVGFLVGNRKEDRKEFWVMGGYGASRTISGVFPVDEYYRDAVVMEFNNGVGDGKWREVGDMWGEGERMRLGKIGVVENEDQSCPGVFMLDGNEILRYDMSLNRWLYESRVPRKAPYKSSFGFVVLDGELYVMRHSRVADMTETRRCRHHKRAATLYIQIYHPKKKKWRSMFTKLPFSYPIDINSAVLSSICL 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3080 420 Pfam Kelch motif 114 166 IPR006652 GO:0005515
Glsi02g3080 420 Pfam Kelch motif 175 219 IPR006652 GO:0005515
Glsi02g3080 420 SUPERFAMILY F-box domain 22 109 IPR036047 GO:0005515
Glsi02g3080 420 PANTHER F-BOX/KELCH-REPEAT PROTEIN OR23 2 420 - -
Glsi02g3080 420 Gene3D - 77 406 IPR015915 GO:0005515
Glsi02g3080 420 SMART kelc_smart 125 180 IPR006652 GO:0005515
Glsi02g3080 420 SMART kelc_smart 183 236 IPR006652 GO:0005515
Glsi02g3080 420 SUPERFAMILY Kelch motif 81 398 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3080 Glsi-ChrGlsi02 79368058 79371146 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3080 02 79368058 79371146 Glsi02g3080 02 79368058 79371146 ECH