Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3030 ATGAAGGAGATTTTGCAAACCCCAACACCCGAATCAAAAATGGTTGATGAAGCAACATTAGAGACCTTAGAGGAGCCCAATTGGGGCTTGAATCTGAGGATATGTGCAATGATCAATAGTGAAGAGTTTAATGGATCCGAGATTGTTAAGGCTATCAAGAAGAAGATTTCAAGCAAGAGCTTTGTGAGCCAGAGGCTCAGTCTTGACTTGTTGGAAGCTTGTGCTATGAATTGTGAGAAGGTGTTTTCTGAAGTGGCATCAGAGAAGGTGCTTGAAGATATGGTTCGATTGATTGATAATCCACAAACAGATCATCAGAATAGAAGAAGGGCTTCGCAGTTGATCAGGGCTTGGGGAGAGTCAGAGGATCTTGCTTATCTACCAGTGTTTCGTCAAACTTATATGAGTTTGAAAGGACGAGATCCTCTAGACATAGATGGTGAAAATTCAGCACCGGTGCCATATTCCTTGGAGTCATATGTACACCAAGAGCCATTAGATCCTCCTGAAAATTACCCTATTACTTATACAGGAGTGCATGAGATGGATGGCTCTGCCTTCTCTTCTAATCAGCAAGGCCTATCAGTTGAAGAAAAAAAGGAGCATCTTATCATCGCTCGAAACAGTCTTGAATTACTCTCCATGATATTAAATTCTGAGGCAGAGCCAAAAACTTTGAAGGAAGATGTAACCGTGAGCTTGTTGGAGAAGTGCAAGCAGTCACTGCCTGTCATCCAGGGAATTGTGCAAAGCACCACTAATGATGAAGGGACACTTTTTGAGGCCTTATACCTTAACGATGAGCTACAACAGGTAGTTTCCAAGTATGAGGAGTTGGAAGCTGCTCAAAAGTCTGGAGCACAACCTGGAAATGCTGAGACCACCAAGCATGATGCACAAGCTGTTCGAAATCCTATTGAACTGCCTGAAAGCTTTGAAGGTGATGAATCTAGGGAGTCGGAAGCTGCTCAGAGACTTCAACGAAAGCCGCCCAAAATGTTGGACACTCTTGAAGTTAATTCAGCTGCTGGAGGTGAGGATCACCGTGAGACCAAAACTGTGGATTGCACGAAAGACGAGGATGCTGAATCGAGCTGCAAGAGGAATGCTGAATGA 1116 0.4373 MKEILQTPTPESKMVDEATLETLEEPNWGLNLRICAMINSEEFNGSEIVKAIKKKISSKSFVSQRLSLDLLEACAMNCEKVFSEVASEKVLEDMVRLIDNPQTDHQNRRRASQLIRAWGESEDLAYLPVFRQTYMSLKGRDPLDIDGENSAPVPYSLESYVHQEPLDPPENYPITYTGVHEMDGSAFSSNQQGLSVEEKKEHLIIARNSLELLSMILNSEAEPKTLKEDVTVSLLEKCKQSLPVIQGIVQSTTNDEGTLFEALYLNDELQQVVSKYEELEAAQKSGAQPGNAETTKHDAQAVRNPIELPESFEGDESRESEAAQRLQRKPPKMLDTLEVNSAAGGEDHRETKTVDCTKDEDAESSCKRNAE 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3030 371 Pfam VHS domain 12 120 IPR002014 GO:0035091|GO:0043130
Glsi02g3030 371 Gene3D - 4 153 IPR008942 -
Glsi02g3030 371 ProSiteProfiles VHS domain profile. 18 138 IPR002014 GO:0035091|GO:0043130
Glsi02g3030 371 MobiDBLite consensus disorder prediction 281 371 - -
Glsi02g3030 371 Pfam GAT domain 207 280 IPR004152 GO:0035091|GO:0043130
Glsi02g3030 371 CDD VHS 12 138 - -
Glsi02g3030 371 MobiDBLite consensus disorder prediction 342 371 - -
Glsi02g3030 371 SUPERFAMILY GAT-like domain 165 280 - -
Glsi02g3030 371 PANTHER TOM1-LIKE PROTEIN 1 1 341 IPR044836 GO:0035091|GO:0043130|GO:0043328
Glsi02g3030 371 Gene3D - 187 283 IPR038425 -
Glsi02g3030 371 ProSiteProfiles GAT domain profile. 194 281 IPR004152 GO:0035091|GO:0043130
Glsi02g3030 371 SUPERFAMILY ENTH/VHS domain 7 140 IPR008942 -
Glsi02g3030 371 SMART VHS_2 11 141 IPR002014 GO:0035091|GO:0043130
Glsi02g3030 371 MobiDBLite consensus disorder prediction 309 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3030 Glsi-ChrGlsi02 78957155 78959287 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3030 02 78957155 78959287 Glsi02g3030 02 78957155 78959287 ECH