Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3025 ATGGGTTCTCTGCCTCCATTTTCAGATGCTCTTTCTACCCCGCCATCCAAACAAGCCCTTCATCCCATTGACGAAGCCACCCTCCTTAACCTCTTCAAATCCCAACAGAACCACATCAACTTCTTCTTCAACAACATCGATCATTCCCAAACCCTAGCCTTCACTCGTACCCTCCTCAATTCCACCGGTACCATCTTCTTCTCTGGCGTCGGCAAGTCTGGCTTCGTCGCCCACAAGATCTCTCAGACTCTTGTCTCTCTCGGTATCCGATCTGCATTCCTATCACCTGTGGATGCCCTCCACGGCGATATCGGTATTCTTACCCATCAGGATGTCCTCGTCCTCTTCAGCAAGTCTGGTACCACTGAGGAACTCCTTAGGCTTGTGCCCTGTGCGAGGGCCAAAGGGGTTTATTTGATCTCGGTCACCTCCGTGGAAGGGAATGCCTTGGCGGGCATGTGCGATATGAACGTGCATTTGCCTTTGGAGAGGGAACTGTGCCCCTTTAACTTGGCGCCGGTGACTTCCACGGCCATCCAGATGGTTTTCGGGGATACGGTGGCCATTGCGCTTATGGGAGCCAGAAATTTGAGCAAGGAGGACTACGCGGGAAATCACCCCGCAGGGAAGATTGGCAAGAGCCTTATCTTCAAGGTAAAGGATGTCATGAAGAAGCAGGATGAGCTTCCCGTTTGCCGGGAAGCAGATTTAATTATGGACCAGCTTGTGGAATTGACGAGTAAAGGATGTGGGTGCCTGCTTGTTATAGATGAGGAACATCATCTGATTGGTACGTTTACAGATGGTGATCTACGACGCACTCTCAAAGCTAGTGGGGAGGGCATTTTCAAGCTCACTGTGGGGGAAATGTGCAACAGGAATCCAAAAATCATTGGTCCAGATGCTATGGCAGTGGATGCCATGAAGAAGATGGAAGCGCCTCCATCACCTGTACAGTTTTTGCCTGTGATCGGTGATGATAATATCTTGATTGGGATTGTCACTTTGCATGGTTTGGTTTCAGCTGGTTTGTGA 1035 0.5014 MGSLPPFSDALSTPPSKQALHPIDEATLLNLFKSQQNHINFFFNNIDHSQTLAFTRTLLNSTGTIFFSGVGKSGFVAHKISQTLVSLGIRSAFLSPVDALHGDIGILTHQDVLVLFSKSGTTEELLRLVPCARAKGVYLISVTSVEGNALAGMCDMNVHLPLERELCPFNLAPVTSTAIQMVFGDTVAIALMGARNLSKEDYAGNHPAGKIGKSLIFKVKDVMKKQDELPVCREADLIMDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRNPKIIGPDAMAVDAMKKMEAPPSPVQFLPVIGDDNILIGIVTLHGLVSAGL 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3025 344 ProSiteProfiles SIS domain profile. 54 197 IPR001347 GO:0097367|GO:1901135
Glsi02g3025 344 Pfam SIS domain 59 189 IPR001347 GO:0097367|GO:1901135
Glsi02g3025 344 Pfam CBS domain 287 342 IPR000644 -
Glsi02g3025 344 Pfam CBS domain 219 276 IPR000644 -
Glsi02g3025 344 CDD SIS_Kpsf 63 190 IPR035474 -
Glsi02g3025 344 PANTHER - 2 344 - -
Glsi02g3025 344 Gene3D - 25 213 - -
Glsi02g3025 344 Gene3D - 214 342 IPR046342 -
Glsi02g3025 344 ProSiteProfiles CBS domain profile. 291 344 IPR000644 -
Glsi02g3025 344 ProSiteProfiles CBS domain profile. 223 285 IPR000644 -
Glsi02g3025 344 SUPERFAMILY SIS domain 30 343 IPR046348 GO:0097367|GO:1901135
Glsi02g3025 344 CDD CBS_pair_SIS_assoc 215 340 - -
Glsi02g3025 344 PIRSF KdsD_KpsF 13 344 IPR004800 GO:0005975|GO:0016853
Glsi02g3025 344 NCBIfam KpsF/GutQ family sugar-phosphate isomerase 63 334 IPR004800 GO:0005975|GO:0016853
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3025 Glsi-ChrGlsi02 78911329 78913796 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3025 02 78911329 78913796 Glsi02g3025 02 78911329 78913796 ECH