Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3019 ATGTCAGAAGTATTGCGCTTTGTTGTTTTTAAATTGAATTTGGGTGGTGGGCCAACATTTTGCTCCAAACTCGGGTCTGCTCATCCAGAGTCTACCTGTTTAGTGTTGGATTGGTTCTGGGGTTGTACCTCCTCTGAACAAATTTTTGTCACTGGAAAGGTGAAAGAGAGAACAACTGCGACACCATCCCTTAAGAAGCATCATCAACGTGCCTGGTTTTCACCTGATGACAAATTCTCAAGACAGAGTTCTCCTGAAGAAGCGCTTTGGATTGTTGCCAACCCAGCAGCCACCTCCGAATCGAGGGACAGTTTTGGAAATTGGTCCAGTCTTTGTAAGCTTAACTCTTCACCACTGAAGGCGAATCGAAACCCCGGTCTCAGTTTCAGACTCTCACTAGAAGTCGTCGCCTGCAAAGTGGAGGCAGTAACTCGCTTTCGGATACAACTTTCGCGAATGGCCAGAAACCTAGCAGGATTTCTGGTGCTGTTTTTGGCTCTTTCGATCTGCCAAGCTGCCACGATTTTTGAGCCGATCTCTGACTCTCACCGATCTGCCGCCTTAGACCTCTTCGCCCCCACTGATGGCTCATTTGCAAGTTTAGAAGATACATATGAGGCCTTAAGAGTTTTTGATATTCTTGCCGTTGAAAAGAAGCCTGATGTCCACACAATCACTTGTCAGAAAGTGTTGGAAAATCTTGGGTCATCGTCTCCTCTAAAGGATTTGTTCTATGCCTTAAAAGCTAATAGCTTATCAAAATGCCGGGTCAATGAGGAGATTTTCAAGGATATTGCCTCGAGACTTAAAGCCACTATCAATGATGCAAGTACATTGCTTGACCTATACTACTCAGTAGGAAGTTTGGTTCTTATCAAGGATCATGCTTCTAATGTTGATGTTCTTCTTGCTGATGCTGATGGAACATTTCATTCTATCAAGGCTTTGAGCCAGAGTGATGGAAGATGGCGATATAGCTCTAATAATCCAGAATCTAGTACCTATGCTGCCGGATTAGCACTTGAAGCACTTGCTGGAGTGATCTCACTAGCATCTTCTGAAATTGATCAGTCTAGGATCAAAACGGTGAAAAATGATATTATCAATCTGTTTGACAGCATTGAGAAATATGATGATGGGACCTTTTACTTTGATGAGAAAATTATTGGGGCACCTGAACATCAGGGTTCTCTTGCCACTACCGCTTCAGTTGTTCGAGGGCTTACAGCATTTGCCACTGTAATTTCTGGAAAAAAAAATCTTCCAGGGGATAAAATACTGGGTTTAGCAAAATTCTTCTTGGGCATTGGAATCCCAGGAGATGCAAAGGATTTCTTTAATCAAGTAGAATCATTAGCTCTTCTAGAGAGCAATAGGGTCTCCATTCCATTGATATTGTCACTTCCTGCAACAGTTTATTCTTTGACCCAGAAAGACCAGATTAAGGTTAGGGTGAATACAGTGCTTGGTTCAGCTGCGCCGCCTCTAACTGTTAAGCTTGTCCGAGCTTTCAGCACTGGTTCTAAAGATTCAGCTATTATTGAGAGTAAGGAGCTCCAGTATGAACCAAAAAGTGGATTTCATGTCTTGGATGTTTTCTCAAAGAATGTGGATGTGGAAACTTATGTGTTTGTTTTTGAGATGGTCCTTCATGATTCTGATAGTGAAAATGACTATGCAACTGGAGGCAAAATTCATGTACCAATATACATCACCGGAATTATTAAAGTTGGAAATGCAGAAATTGCAGTTCTGGACAGTGATCTTGGAAGTATTGAAACCCAGAAAACGCTAGATTTGGCTGAACATGGTGTTGTTTCACTATCAGCTAACCACCTGCAAAAGCTGCGTTTGTCTTTTCAATTGATATCGCCTCATGGCCAAGCTTTTAAGCCTCAACAGGCATTTCTCAAGTTGAGACATGAGACAAGAGTAGAGCACCTATTTGTGGTTGGAAATACTGGCAAGAAATTTGAGATAATTCTGGATTTTCTTGGCTTGGTGGATAAATTTTTTTATCTCTCAGGCAGATATGACATTGAGCTGACTGTTGGCGATGCTGTCATGGAGAACTCTTTCTTGCGACCTCTTGGCTATGTTGAATTAGATCTTCCAGAAGCACCTGAGAAGGCAGCCCGCCCTCCTCCACCATCTGTAGACCCTTACTCAAGATATGGGCCAAAAGCTGAGATAACCCATTTATTCAGGGCTCCTGAAAAGCGACCACCCCAGAAATTGTCTCTCACTTTCTTGAGTTTGACCCTTCTGCCGTTCATTGGCTTTTTGGTTGGGCTATTACGCTTAGGAGTCAACCTGAAGAATTTCCCTTCTTCAGCAGTGCCCGCTACATATGCCATCCTCTTCCATCTTGGCATTGCTGCAGTTCTGTTGCTTTATGTACTTTTCTGGTTGAAGCTGGACCTGTTTACCACATTGAAAACACTGGGTCTTTTAGGAGCATTTTTGATGTTTGTGGGACACAGAATTCTATCCCATCTGGCTTCTACATCAACCAAGTTGAAGTCTGCCTAA 2532 0.4273 MSEVLRFVVFKLNLGGGPTFCSKLGSAHPESTCLVLDWFWGCTSSEQIFVTGKVKERTTATPSLKKHHQRAWFSPDDKFSRQSSPEEALWIVANPAATSESRDSFGNWSSLCKLNSSPLKANRNPGLSFRLSLEVVACKVEAVTRFRIQLSRMARNLAGFLVLFLALSICQAATIFEPISDSHRSAALDLFAPTDGSFASLEDTYEALRVFDILAVEKKPDVHTITCQKVLENLGSSSPLKDLFYALKANSLSKCRVNEEIFKDIASRLKATINDASTLLDLYYSVGSLVLIKDHASNVDVLLADADGTFHSIKALSQSDGRWRYSSNNPESSTYAAGLALEALAGVISLASSEIDQSRIKTVKNDIINLFDSIEKYDDGTFYFDEKIIGAPEHQGSLATTASVVRGLTAFATVISGKKNLPGDKILGLAKFFLGIGIPGDAKDFFNQVESLALLESNRVSIPLILSLPATVYSLTQKDQIKVRVNTVLGSAAPPLTVKLVRAFSTGSKDSAIIESKELQYEPKSGFHVLDVFSKNVDVETYVFVFEMVLHDSDSENDYATGGKIHVPIYITGIIKVGNAEIAVLDSDLGSIETQKTLDLAEHGVVSLSANHLQKLRLSFQLISPHGQAFKPQQAFLKLRHETRVEHLFVVGNTGKKFEIILDFLGLVDKFFYLSGRYDIELTVGDAVMENSFLRPLGYVELDLPEAPEKAARPPPPSVDPYSRYGPKAEITHLFRAPEKRPPQKLSLTFLSLTLLPFIGFLVGLLRLGVNLKNFPSSAVPATYAILFHLGIAAVLLLYVLFWLKLDLFTTLKTLGLLGAFLMFVGHRILSHLASTSTKLKSA 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3019 843 PANTHER RIBOPHORIN II 162 842 IPR008814 GO:0006487|GO:0008250|GO:0016020
Glsi02g3019 843 Pfam Oligosaccharyltransferase subunit Ribophorin II 161 835 IPR008814 GO:0006487|GO:0008250|GO:0016020
Glsi02g3019 843 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 183 411 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3019 Glsi-ChrGlsi02 78831822 78842592 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3019 02 78831822 78842592 Glsi11g0749 11 4738705 4746300 CCT
Glsi02g3019 02 78831822 78842592 Glsi02g3019 02 78831822 78842592 ECH