Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3007 ATGGCAACTCCAGGTCTCTACCGCAGAGTCCTCCCTTCTCCCCCTGCCATCGAGTTTGCTTCCCCGGAAGGCAAGAAAATCTTTGCCGAAGCTCTTGCACAAGGAACCATGGAGGGCTTCTTCAAATTAATTTCATACTATCAGACACAGTCTGAGCCTGCGTTCTGTGGACTGGCCACACTTGCAACGGTCCTTAATGCGCTTGCTATTGATCCTGGTAGAAAATGGAAAGGCCCTTGGAGATGGTTTGATGATTCCATGTTGGATTGCTGTGAGCCTGTGGCCAAGATCAAAGTGGAAGGCATTACATTTGGAAAAGTTGCATGTTTGGCTCGATGCAATGGAGCTAAAGTTGAAGCTTTTCGAACAAATGAAAGAACTATTGATGATTTTCGCAAGAATGTAATTTCTTGTAGTTCTTCAGAGGATTGTCATGTGATTGTATCATATCACAGAGCAGCATTTAATCAGACTGGAACTGGTCATTTTTCACCGCTTGGGGGCTACCATGCTGAAAGGGATATGGTCCTCATTTTGGATGTTGCACGTTTCAAATATCCTCCTCACTGGGTTCCTCTTAGCCTTCTCTGGGAGGCCATGAATACCATTGATAAAGCAACTGGACATCATAGAGGGTACATGACTATTTCAAGGCTTAACCGGGCACCATCAATACTTTATACTGTGAGTTGCAGACATGAAGGTTGGAACAGTGTTGTTAAATACTTAACGGAAGACATCCCGCTTCTTTTGAAGTCAGAGGATTTAAAAGACTTTCAGAAAGTACTCTCTGTTGTATTTAAGTCTCCTCCTACTGAATTGAGAGGGTTCATATCATGGGTTGCTGAAGTTCGCAGGAAAGAGGATGGAAGTCTCATCTTAAGTGAAGAGGAGAGAGGAAGGCTAGCTATCAAGGCAGACATATTGGAACAAATTCGAGCAACAGCACTCTTTAAACATGTGACCCGATGGTTGGATTCTGAAAGTTCGTGTTGCAATACTTACGCAAACCTTGGTGATAAAGATAAGTTATCTGCACTTGCTGCAAGTGTTTGTTGCCAAGGGGTAGATCTTTTGACTGGTTGTGGTAGGCTAGGTTTGTCAGGTGAGAAAGACTGCGGTCAAATAAATGTACAGCATTTGGATGCTGATAGTGAAAATCCAGTGACATTGATTTCTGGAACTGTTACAACTGGGGGCGGTGAACAAGGAGTTGATGTGTTGGTCCCTTTGTGCCAAAGGGAACTAAGTAGGTTGTGTCTTTCCGATAAAGGTCGCTGCATTGGAATGCACCCATCTACTGTAGATGTTTTAACAGTGCTTTTATTGTCCTTGCCCCTACATACATGGTCAGGCATTAAAGAAGAAAAGCTGCGGGTGGAAATTACAAGCCTTTTAACAACTGAAAATCTTCCTCCCTTGCTTCAGGAAGAGGTTCTGTTCTTGCGAGAACAGCTCTATTTTCTCAAGACTGATATCGGTGCTCCTTCGTCATGA 1497 0.4362 MATPGLYRRVLPSPPAIEFASPEGKKIFAEALAQGTMEGFFKLISYYQTQSEPAFCGLATLATVLNALAIDPGRKWKGPWRWFDDSMLDCCEPVAKIKVEGITFGKVACLARCNGAKVEAFRTNERTIDDFRKNVISCSSSEDCHVIVSYHRAAFNQTGTGHFSPLGGYHAERDMVLILDVARFKYPPHWVPLSLLWEAMNTIDKATGHHRGYMTISRLNRAPSILYTVSCRHEGWNSVVKYLTEDIPLLLKSEDLKDFQKVLSVVFKSPPTELRGFISWVAEVRRKEDGSLILSEEERGRLAIKADILEQIRATALFKHVTRWLDSESSCCNTYANLGDKDKLSALAASVCCQGVDLLTGCGRLGLSGEKDCGQINVQHLDADSENPVTLISGTVTTGGGEQGVDVLVPLCQRELSRLCLSDKGRCIGMHPSTVDVLTVLLLSLPLHTWSGIKEEKLRVEITSLLTTENLPPLLQEEVLFLREQLYFLKTDIGAPSS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3007 498 Pfam Phytochelatin synthase 7 213 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Glsi02g3007 498 Gene3D - 16 221 IPR038156 -
Glsi02g3007 498 FunFam Glutathione gamma-glutamylcysteinyltransferase 1 15 220 - -
Glsi02g3007 498 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 4 485 IPR040409 GO:0016756|GO:0046872|GO:0046938
Glsi02g3007 498 SUPERFAMILY Cysteine proteinases 13 217 IPR038765 -
Glsi02g3007 498 Pfam Domain of unknown function (DUF1984) 231 486 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Glsi02g3007 498 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 221 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3007 Glsi-ChrGlsi02 78750777 78755362 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3007 02 78750777 78755362 Glsi02g3007 02 78750777 78755362 ECH