Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3000 ATGGCGAGACAACTAGTATGGCTGCTCTTCATCCTCGCCGGAGCTACTCCGAGTGCCTCCTCCGACAGCGCTGAATTCACCGGAGATTATTCCAAACTCTCCGGCATCATTATCCCAGGCTTCGCGTCTACTCAACTCCGAGCTTGGTCTATTCTTGACTGCCCTTACTCTCCGCTCGATTTCAACCCTCTCGATTTGGTCTGGCTCGACACCACCAAAGTGCCTAAAACTGATGAACATCTTCTTTCTGCTGTCAATTGTTGGCTTAAGTGCATGATGCTGGACCCTTACAATCAGACGGATCACCCTCAATGTAAATCCCGGCCTGATAGTGGTCTTTCCGCTATTACAGAACTTGATCCAGGTCCTCTTTCTTCAGTGTGGAAAGAATGGATAAAGTGGTGTATTGAATTTGGCATAGAAGCTAACGCAATCATTGCCGTTCCATACGATTGGAGATTGTCACCTTCTATGCTAGAAAAGCGAGATCTTTATTTTCATAAGCTAAAATTGACATTTGAAACCGCTTTTAAACTTCGTGGTGGCCCCTCTATAGTTTTTGCCCATTCATTGGGTAATCAGGTCTTTCGATATTTCTTGGAGTGGTTAAAGCTGGAAATTGCACCAAAACATTATATCCCATGGCTGGATCAACATATTCATGCCTATTTTGCTGTTGGAGCTCCCCTTCTTGGTGCAACTGAGACCGTAGAAGCAACACTTTCTGGATTTACTGTTACCAAACAGACTGATGTTGGTCAAACCCTGAGAATTCTTCTCATGACATGGGATAGAGTTAGGAATTTGACTACTCTTGCATTTGAAGTGAACTTAAGGTGTCAGGGAACAGCTCGACTGATGTTCAACTCCTTTGCTTCATCATTATGGATGATGCCTTTTTCCAAGTACTGTAGAGCAGATAATAAATATTGGAAGCATTTTTCTTTGGAAGGCCATGTAGGCCGTCATGCATATCACTGTGATGAGCAGGAGTTTCATTCAAACTTCTCTGGATGGCCGACAAACATAATCAATATTGAAATTCCTTCAACCCCTTCAACCCGTGGATTTGATGCATATCCTTCATTCTCAGAAATACCTCAGGCGAACCTTTCCAGCATGGAATGTGGACTACCTACTCAGTTATCTTTCTCAGCTCGTGAAATATCAGATGGCACCTTTTTCAAAGCAATAGAAGATTATGACCCAGACAGCAAGAGGATCCTGTACCAGTTAGAGAAATCATATCTAGGTGATACTATTCTTAATCCACTGACACCTTGGGACCGACCACCAATAAAAAATGTCTTTTGCATTTATGGCACTGATTCAAAGACTAAGGAATACCTTAATGAAAGCAGGGTTGGTTACTACTTTGCTCCAAGTGGCAAGCCTTACCCTGATAACTGGATTATCACAGACATCATTTATGAGATTGAAGGATCTCTAATCTCAAGGTCAGGGAATCTGGTTGAAGGGCATCCTGGAGCCACAAGTGGAGATGAGACGGTTAGCTTCAATTATGATTCCTTTACTGCAATTGTACCATACCACTCCCTTGCTTGGTGCAAGAACTGGCTTGGACCAAAGGTGAACATAACAAGAGCTCCTCAGTCAGAGCATGATGGATCAGATGTACAAGTTGAATTGAATGTGGAACATCTCGATGAAGAAGATATTGTTCCAAACATGACAAGATCACCTAAGGTTAAGTACATAACTTTTTATGAAGATTCTCAAAGTCTTCCTGGAAAGAGGACAGCAGTTTGGGAGCTTGATAAAGCAAATCACAGGAACATTGTTAGATCACCAGTTCTAATGAGGGAGTTATGGCTTGAGATGTGGCATGATATTCATCCTGGTGCAAAAGCAGATTTTGTAACAAAAGCCAAGCGTGGACCTCTAAGAGATGAGGACTGTTATTGGGATTATGGGAAAGCTCGTTGTGCTTGGCCAGAATATTGTGAATATAGGTATGTATTTGGGGATGTTCACCTTGGACAGAGCTGTAGACTGAAAAGTTCTTCAGCTGATCTATTGTTGCATTATTTGTAA 2055 0.4234 MARQLVWLLFILAGATPSASSDSAEFTGDYSKLSGIIIPGFASTQLRAWSILDCPYSPLDFNPLDLVWLDTTKVPKTDEHLLSAVNCWLKCMMLDPYNQTDHPQCKSRPDSGLSAITELDPGPLSSVWKEWIKWCIEFGIEANAIIAVPYDWRLSPSMLEKRDLYFHKLKLTFETAFKLRGGPSIVFAHSLGNQVFRYFLEWLKLEIAPKHYIPWLDQHIHAYFAVGAPLLGATETVEATLSGFTVTKQTDVGQTLRILLMTWDRVRNLTTLAFEVNLRCQGTARLMFNSFASSLWMMPFSKYCRADNKYWKHFSLEGHVGRHAYHCDEQEFHSNFSGWPTNIINIEIPSTPSTRGFDAYPSFSEIPQANLSSMECGLPTQLSFSAREISDGTFFKAIEDYDPDSKRILYQLEKSYLGDTILNPLTPWDRPPIKNVFCIYGTDSKTKEYLNESRVGYYFAPSGKPYPDNWIITDIIYEIEGSLISRSGNLVEGHPGATSGDETVSFNYDSFTAIVPYHSLAWCKNWLGPKVNITRAPQSEHDGSDVQVELNVEHLDEEDIVPNMTRSPKVKYITFYEDSQSLPGKRTAVWELDKANHRNIVRSPVLMRELWLEMWHDIHPGAKADFVTKAKRGPLRDEDCYWDYGKARCAWPEYCEYRYVFGDVHLGQSCRLKSSSADLLLHYL 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3000 684 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 30 656 - -
Glsi02g3000 684 Pfam Lecithin:cholesterol acyltransferase 66 245 IPR003386 GO:0006629|GO:0008374
Glsi02g3000 684 Pfam Lecithin:cholesterol acyltransferase 281 554 IPR003386 GO:0006629|GO:0008374
Glsi02g3000 684 Gene3D alpha/beta hydrolase 99 275 IPR029058 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3000 5 684 Acyl Lipid Metabolism Gene Families AT1G04010 69.635 0.0 979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3000 02 78708218 78717917 Glsi02g3000 02 78708218 78717917 ECH