Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2986 ATGGGTATGATAAGAAAACCTTCATCTCTCCCCTCTCTGTTTCTCCTTGCTATTTTCGGGCTCTTTCTCTATCCTATTTCAGCTGCAGATAACACAAACTTGGTTTACAAGGGCTGTGCAGACCAGAAATTGCAAGACCCATCTGGTATTTACTCACAAAACCTCGAAGCCCTTCTCGCATCTCTTGTCTCACAATCTGGGCAAAAGGCCTTCTCCTCCACTACCTCTGGCGACGGTCAGAATGCGATAACGGGTCTGTATCAATGTAGAGGAGACCTCACAAACTCGGAGTGCTACAAATGCGTGAGCAAGATTCCGGATATGCTCGACAAGCTCTGTGGCAAGGTGGCGGCGGCGCGGGTCCAGCTCAATGGATGCTATATGCTGTACGAGATCGCTGGTTTCAAGGAGGTCCCCGGGACTCAGTTGCTTTACAAGGTTTGCGGGTCGATTCGGGCTAGCGGAAGTGGGTTCGAGGAGAGAAGAGACACGGCGTTTGGGATGGTGGAAAATGGAGTGAAAAGTGGTGGAAGTTTGTTCTACACAGGGAGCTACCAGTCTCTGTATGTGTTGGGGCAGTGTGAGGGTGATTTGGGTAATGATTGTGGGGATTGTGTAAAGAGTGCTGAGGAACAAGCCAAAACACAGTGCGGTGACTCAATTTCTGCCCAGATTTATCTGCAAAAGTGCTATATCAGCTACAACTTTTACCCCAATGGAGTGCCCAGCGTCTCATCTTCGACAGTTGGATCAGGGACAGGGCCACACAGCACACAGAGGACAGTGGCTCTTGCGGTAGGAGGCGTTGCAGCTCTGGGATTCGTAATTGCTTGTTTGTTATTTGTGAAGTCAGTGTTTAAGAAACGAGGTGATCCAATTTGCGGTGTTAATGGAGGAAGTGCAGTGTGGGGCACAAGTTTATTGCGTGGTGGGAGATAG 939 0.4941 MGMIRKPSSLPSLFLLAIFGLFLYPISAADNTNLVYKGCADQKLQDPSGIYSQNLEALLASLVSQSGQKAFSSTTSGDGQNAITGLYQCRGDLTNSECYKCVSKIPDMLDKLCGKVAAARVQLNGCYMLYEIAGFKEVPGTQLLYKVCGSIRASGSGFEERRDTAFGMVENGVKSGGSLFYTGSYQSLYVLGQCEGDLGNDCGDCVKSAEEQAKTQCGDSISAQIYLQKCYISYNFYPNGVPSVSSSTVGSGTGPHSTQRTVALAVGGVAALGFVIACLLFVKSVFKKRGDPICGVNGGSAVWGTSLLRGGR 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2986 312 ProSiteProfiles Gnk2-homologous domain profile. 32 135 IPR002902 -
Glsi02g2986 312 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 12 286 - -
Glsi02g2986 312 Gene3D - 142 238 IPR038408 -
Glsi02g2986 312 Gene3D - 30 135 IPR038408 -
Glsi02g2986 312 ProSiteProfiles Gnk2-homologous domain profile. 140 239 IPR002902 -
Glsi02g2986 312 FunFam cysteine-rich repeat secretory protein 3 31 135 - -
Glsi02g2986 312 Pfam Salt stress response/antifungal 157 236 IPR002902 -
Glsi02g2986 312 Pfam Salt stress response/antifungal 46 131 IPR002902 -
Glsi02g2986 312 FunFam cysteine-rich repeat secretory protein 3 141 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2986 Glsi-ChrGlsi02 78601230 78602989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2986 16 238 Receptor kinase-like Gene Family AT4G05200 24.066 7.64e-11 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2986 02 78601230 78602989 Glsi02g2986 02 78601230 78602989 ECH