Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2965 ATGGATGAAATTCAAAGAAAAATGACGGGATTTCCTCGGCCTTACGATCAGACCTCACCTACATCCTCGTCTTCCTATAATTCCAACAGCAGTGGTAAAAATGTTTTTAGTTTGCTAGCTCGGAGAGAGATTTCAACTATATCAAAACATGTGCCAAAATGGCATTGGGGAGACGCTTCTAAATCAAAAAGTGGTTCTTGCCCTCGTCCTAAGTATGATGTGGTGAGAGATGCAAAACACGGTCTTCACTCATGGGTTGAGGCGGAGTCATTGCGGCATTTGTCAGCTAAGTATTGCCCTTTGCTGCCTCCTCCACGTTCTACTATTGCAGCAGCATTTAGTCCAGATGGAAGAGTGCTTGCATCCACACATGGTGACCACACAGTAAAGATAATTGATTGTGAAACTGGAAGTTGCTTAAAGGTGTTAATTGGCCATAGGAGGACCCCTTGGGTGGTCAGGTTCCATCCATTGCAACCGCAAATACTTGCTAGTGGGAGCTTGGATCAAGAAGTTCGCTTATGGGATTCCGACACGTCAGAGTGCATAATATCTCACCATTTCTATCGTCCCATTGCTTCCATTGCTTTCCATGCCAAAGGGGAAATACTTGCTGTTGCATCAGGTCACAAGCTGTACATATGGCACTACAACCAGAGAGGCGAAGCATCCTCACCAACATTTGTGTTGAAGACACGGCGGTCGCTTAGGGCTGTGCACTTTCACCCGCATGGCGCACCTTATCTTTTAACTGCTGAGGTCAATGATCTTGACTCTTCAGATTCCTCAATGACACAGGCAACATCCCTTGGTTATTTACAATACCCCCCACCTGCTGTGATTGTTGCAAATATTCATTTTAAGGAACACATTAGTTTGTCTAGTGAACTACCTTTTATGTCATTACCATTTTTCTTCATGCCTTCATATACTGTTGATGATTCAAGAATAGAACTACAGAATGCTGGTCATGTTGCTGGTTCAGATAGCATGCAAGTTGAATCTTCTGCATCAGTGCAGTATCAAGCAGTCATAAATGCTACCGAGCAGTATGATAGTAGAGTGTCCCCCATGGATACATTCTCCGAGATTCCCTCTAGCTCTCAATCTGGTACAGAATACACTGCCCATACAACTTTCTCTAATGGAATGGGAATTGGTATCAGTAACCTCACTATGGATGGTATGGAGACTGATGAAACAGAAAATGCTAAAGGAATCCAACATGGAAACTCTACTAATGTCTATTCCTTGAGTAGTGTGCTACATGGACTATCTAGACAAACAGCAAACCGTGAGGTTCCCCCTGAGTTGGGTCAATTTCAGAATTTTTTTCCTTCAAGAGACACAAGTGGGTGGGAGTTACCCTTTTTGCAAGGATGGTTAATGGGTCAAAGCCAAGTCGGTGTTCCCTTGATGCTTCCTCACATGAGTGGTAATCGTGACAGTCTAGCTCAACAGACTGGTTATTCCTCCATGGCTTCTAATTTGTCCACTCATGATACTGAAGCTGCAATTTCATCTTCAGTTATGCCTGGCAGCACAAGTATATCGGGAGCTTCAGTGAGATCTGGTTTACGGAGTCATTTTCCACAATCCCAAGTTCCTGCATCTGAATCTGGCAATGTTGCTGCTTCTATTAATACCCCACATGATGGGACTGATATCCAAACCATTATAAGTCGGATCCAGTCAGAACTTGCCACATCGATGGCTGCTGCAGCTGCTGCAGAGTTGCCTTGCACAGTGAAGCTAAGAGTATGGTCACATGACATAAAAAATCCCTGTGCACCACTAAATGCTGAAAGATGCCGCCTAACCATACCACATGCTGTCCTTTGCAGCGAAATGGGTGCCCATTTTTCACCATGTGGTAGATTTTTAGCTGCATGTGTTGCATGTATGCTTCCTCATATAGAAGCTGATCCAGGATTACAAACTCTAGTACACCAGGAACCTGGAGTTGCAACATCACCAACGCGGCATCCAATCTCAGCACACCAAGTTATGTATGAGCTTCGCATATATTCCCTTGAGGAGGCAACATTTGGAACGGTGCTTGCGTCGCGGGCAATTAGAGCAGCTCACTGTCTCACTTCAATTCAGTTCTCACCGACATCTGAGCACATACTGCTTGCCTATGGTAGACGTCATGGGTCCCTTCTTAAAAGCATTGTCATTGATGGAGAAACAACTTTACCTATTTATACAGTGTTAGAGGTATACAGAGTATCAGATATGAAACTTGTCATGGTGCTTCCTAGTGCTGAAGATGAGGTCAATGTGGCATGCTTTCATCCTTTTGCTGGGGGAGGGCTTGTTTATGGAACAAAGGAAGGAAAGCTTAGGGTCCTCCACTATGATGGTGATCACACTGTAAATGACACTGGAGCAAGTTACTTTCCTGAGGAGAACATTGCTGGAGCCAATCAATGA 2436 0.4429 MDEIQRKMTGFPRPYDQTSPTSSSSYNSNSSGKNVFSLLARREISTISKHVPKWHWGDASKSKSGSCPRPKYDVVRDAKHGLHSWVEAESLRHLSAKYCPLLPPPRSTIAAAFSPDGRVLASTHGDHTVKIIDCETGSCLKVLIGHRRTPWVVRFHPLQPQILASGSLDQEVRLWDSDTSECIISHHFYRPIASIAFHAKGEILAVASGHKLYIWHYNQRGEASSPTFVLKTRRSLRAVHFHPHGAPYLLTAEVNDLDSSDSSMTQATSLGYLQYPPPAVIVANIHFKEHISLSSELPFMSLPFFFMPSYTVDDSRIELQNAGHVAGSDSMQVESSASVQYQAVINATEQYDSRVSPMDTFSEIPSSSQSGTEYTAHTTFSNGMGIGISNLTMDGMETDETENAKGIQHGNSTNVYSLSSVLHGLSRQTANREVPPELGQFQNFFPSRDTSGWELPFLQGWLMGQSQVGVPLMLPHMSGNRDSLAQQTGYSSMASNLSTHDTEAAISSSVMPGSTSISGASVRSGLRSHFPQSQVPASESGNVAASINTPHDGTDIQTIISRIQSELATSMAAAAAAELPCTVKLRVWSHDIKNPCAPLNAERCRLTIPHAVLCSEMGAHFSPCGRFLAACVACMLPHIEADPGLQTLVHQEPGVATSPTRHPISAHQVMYELRIYSLEEATFGTVLASRAIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTLPIYTVLEVYRVSDMKLVMVLPSAEDEVNVACFHPFAGGGLVYGTKEGKLRVLHYDGDHTVNDTGASYFPEENIAGANQ 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2965 811 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 143 181 - -
Glsi02g2965 811 SMART WD40_4 95 133 IPR001680 GO:0005515
Glsi02g2965 811 SMART WD40_4 179 216 IPR001680 GO:0005515
Glsi02g2965 811 SMART WD40_4 746 786 IPR001680 GO:0005515
Glsi02g2965 811 SMART WD40_4 136 176 IPR001680 GO:0005515
Glsi02g2965 811 MobiDBLite consensus disorder prediction 1 31 - -
Glsi02g2965 811 Gene3D - 94 269 IPR015943 GO:0005515
Glsi02g2965 811 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 105 788 IPR011047 -
Glsi02g2965 811 ProSiteProfiles Trp-Asp (WD) repeats profile. 143 185 IPR001680 GO:0005515
Glsi02g2965 811 MobiDBLite consensus disorder prediction 12 31 - -
Glsi02g2965 811 Pfam WD domain, G-beta repeat 137 176 IPR001680 GO:0005515
Glsi02g2965 811 Pfam WD domain, G-beta repeat 110 133 IPR001680 GO:0005515
Glsi02g2965 811 ProSitePatterns Trp-Asp (WD) repeats signature. 163 177 IPR019775 -
Glsi02g2965 811 PANTHER ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 29 806 - -
Glsi02g2965 811 FunFam Activating molecule in BECN1-regulated autophagy protein 90 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2965 Glsi-ChrGlsi02 78412670 78419123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2965 110 277 Miscellaneous Gene Families AT5G08390 24.862 4.95e-07 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2965 02 78412670 78419123 Glsi02g2965 02 78412670 78419123 ECH