Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2891 ATGAAGAAACAATTGACAGGTATACGGGATGATACTCCCTTACAATCAGCAATCCGAGCAGGAAATTTAGAATTGGCGCTGGAAATCATTTCTGAGAATGGAGATGCAGAATTACAGGAATTGCTTTCTAAGAAAAACCACTCTGGTGAAACTGCCTTATACGTTGCTGCTGAAAGTGGTCATGTTGATTTAGTGAAGGAATTGATCAAGTACCACGATATTGGTTTGGCCGGCTTCAAAGCTAGAAATGGTTTCGATGCATTTCATATTGCTGCAAAAAATGGGGACCTGGAGATATTGAAGGTCCTCAAGGAGGCCATTCCTGAACTTTTAATGACTGTTGATCTGTCAAACACTACAGCCTTGCATACTGCTGCAGCACAAGGACATATCGAGGTAGTAAATTTTCTCTTGGACAAAGGTAGCAGTCTAATTACTATTGCAAAAAGCAACGGGAAAACTGCGTTGCATTCTGCTGCAAGAAATGGCCATGTGGAGGTCGTCAAGGCCCTTTTGGGCAGAGAACCTGAAATTGCTATGAGAATCGATAAGAAGGGTCAGACAGTGCTCCATATGGCAGTTAAAGGACAAAATCTTGAGATGGTAGATGAGCTTGTGAAATCAATTCCATCTTTGACTAACATGGTTGATACCAAGGGGAATACTGCACTGCATATCGCAACCCGGAAGGGTCGTCTACAGATTGTTCGGAAGCTACTTGAGAACAGAGGAACAGACACAGATGTTATTAATAGATCTGGAGAAACTGCTCTGGATATTGCGGAGAAAAATGGATACTTGGACATAACCCATACTCTGCAAGATCGTGGAGCTCAGAGTGCCAGATCCCTTAAGTCGCCTACTACAAACCCTGCCCTTGAACTTAAACGTACAGTAAGTGACATAAAAAGCGGGGTTCATAACCAGCTGGAACACACAATTAGAACACGAAGACGCATGCAAGGGATAGCAAAACGACTTAACAAAATGCAGGCAGAGGGGCTTAACAATGCGATCAACTCCAGCACTGTTGTTGCTGTCCTTATTGCAACAGTTGCTTTTGCTGCCATATTTAACGTCCCAGGCCAGTATCCTGATGACCCAAAGGAACTCGCGCCTGGAATGTCTCCTGGGGAAGCCAACATTGCTCCACAAAAGGCATTTTTGATATTCATCACCTTTGATTCTACTGCCCTCTTCATATCGTTAGCTGTTGTGGTTGTCCAAACATCAATTGTTGTTATTGAGAGGGAAGCAAAGAAACAAATGATGGCGGTTATAAATAAGTTGATGTGGTTAGCCTGTGTGCTAATTTCTGTGGCGTTTCTTGCTATGTCGTACATTGTTGTGGGGGATCATATATGGTTGGCTATTGCAGCATCAGTTTTAGGAACTGTGATTATGGCAGTTACTCTAGGAACACTATGTTATTGGGTGATTGCTAACCGAATTGAGGACTCCAAATTGCGAAGTATTAGGAGGTCGACTATGAGCAGTAGACAGTCATTGTCTATGTCAATGATGTCGAATTCAGAGAATGAGTACAAGACAGTGTATGCAATATGA 1566 0.4272 MKKQLTGIRDDTPLQSAIRAGNLELALEIISENGDAELQELLSKKNHSGETALYVAAESGHVDLVKELIKYHDIGLAGFKARNGFDAFHIAAKNGDLEILKVLKEAIPELLMTVDLSNTTALHTAAAQGHIEVVNFLLDKGSSLITIAKSNGKTALHSAARNGHVEVVKALLGREPEIAMRIDKKGQTVLHMAVKGQNLEMVDELVKSIPSLTNMVDTKGNTALHIATRKGRLQIVRKLLENRGTDTDVINRSGETALDIAEKNGYLDITHTLQDRGAQSARSLKSPTTNPALELKRTVSDIKSGVHNQLEHTIRTRRRMQGIAKRLNKMQAEGLNNAINSSTVVAVLIATVAFAAIFNVPGQYPDDPKELAPGMSPGEANIAPQKAFLIFITFDSTALFISLAVVVVQTSIVVIEREAKKQMMAVINKLMWLACVLISVAFLAMSYIVVGDHIWLAIAASVLGTVIMAVTLGTLCYWVIANRIEDSKLRSIRRSTMSSRQSLSMSMMSNSENEYKTVYAI 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2891 521 ProSiteProfiles Ankyrin repeat region circular profile. 219 252 - -
Glsi02g2891 521 Gene3D - 1 145 IPR036770 -
Glsi02g2891 521 ProSiteProfiles Ankyrin repeat profile. 117 149 IPR002110 GO:0005515
Glsi02g2891 521 SUPERFAMILY Ankyrin repeat 13 278 IPR036770 -
Glsi02g2891 521 Pfam Ankyrin repeats (3 copies) 10 74 IPR002110 GO:0005515
Glsi02g2891 521 SMART ANK_2a 48 76 IPR002110 GO:0005515
Glsi02g2891 521 SMART ANK_2a 83 112 IPR002110 GO:0005515
Glsi02g2891 521 SMART ANK_2a 151 180 IPR002110 GO:0005515
Glsi02g2891 521 SMART ANK_2a 219 249 IPR002110 GO:0005515
Glsi02g2891 521 SMART ANK_2a 117 147 IPR002110 GO:0005515
Glsi02g2891 521 SMART ANK_2a 253 282 IPR002110 GO:0005515
Glsi02g2891 521 SMART ANK_2a 185 214 IPR002110 GO:0005515
Glsi02g2891 521 SMART ANK_2a 9 38 IPR002110 GO:0005515
Glsi02g2891 521 ProSiteProfiles Ankyrin repeat profile. 48 70 IPR002110 GO:0005515
Glsi02g2891 521 Pfam Ankyrin repeats (many copies) 211 261 IPR002110 GO:0005515
Glsi02g2891 521 Pfam Ankyrin repeats (many copies) 118 172 IPR002110 GO:0005515
Glsi02g2891 521 ProSiteProfiles Ankyrin repeat region circular profile. 48 70 - -
Glsi02g2891 521 ProSiteProfiles Ankyrin repeat profile. 219 252 IPR002110 GO:0005515
Glsi02g2891 521 ProSiteProfiles Ankyrin repeat region circular profile. 151 172 - -
Glsi02g2891 521 ProSiteProfiles Ankyrin repeat profile. 151 183 IPR002110 GO:0005515
Glsi02g2891 521 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 9 502 - -
Glsi02g2891 521 Pfam Domain of unknown function 333 449 IPR026961 -
Glsi02g2891 521 Gene3D - 146 332 IPR036770 -
Glsi02g2891 521 ProSiteProfiles Ankyrin repeat region circular profile. 117 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2891 Glsi-ChrGlsi02 77959796 77962338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2891 1 521 Miscellaneous Gene Families AT1G07710 65.779 0.0 641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2891 02 77959796 77962338 Glsi02g2891 02 77959796 77962338 ECH