Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2698 ATGAAGCTTGTGGACAAAAACTTGGCGGTGAACCAGGCGGGGACGGTGAAGATCATCCCTGAAGAACCCGATGATTTGTGGGTCGTTTACAACCTCATTGCCCGCGGAGACGTTATCGCAGCCGATACCACCCGCAAAGTCCACCTTGTGTCCACCAAGAACACCGCCTCCCGTGTCAAACTCACCCTCCCCATCAAGGTCACATGCCTCCACTTCCACAAAGACTCTTCCACCGTGCGGGTCCAAGGCAGGAACATGGAAGCTAATCAGTACGTCGCTGCGGGATCCTTCCACACCTTGACCCTCGAAAGGAACAAAGGGTTTGAACTCACCAAAAAGATTTGGGATTCCGCTGCGCTGGACGCCTTAACCGAAACCTCCGAGAAACTATCTGGTGCCGACCTCGCCGTGCTTCTTCTGCAACAGGGCCAAGCACAGGTTTACTTGGTGGGAAAAGGGTTAACCACGCTTTGCTCCAAAATCGAAGCTTCGCCGGCGAGAAGAAGAGGAACAAGCAACGTGTTTTTCCAAGACGTTTTTAGTGCTTTTGTGAAGCATGTGGATTTCAACACCGTTAAAAGCGTAGTGATAGCAAGTGCTGGCTCGACAAAAGATGAGTTTCGTAGGTTTATGCTGTCGGAAGCGAAAAGATCGAAGATGAAGAGCATTGAAGACAATAAATCGAGAATTATAGTTGCGGCCATGAGCCCGGGAAGTAAGGGTGAATTGAAGGAGGTTCTGAATGACAATGCGGTAATGAATATGATCAAAGACAGCAAGGTAGTGATGGAGATTAAAACTATGAGAGAATTGTGGGACATGTTGTTCTTGAGCAACTCGGGTCGTGCATGTTATGGTCCCAAGAATGTAGAGGCTGCGCAGGAGATGAAGGCGATAGAGACTCTTCTGATCACGGATGATCTATATAGGAACGCAGATATTAAGACGAGGCAAAAATACATGGGTTTGGTTAAATCAGTGAAAGAGGGAGGAGGGAAGGCTTTGGTATATTCCTCCATGCATGTTTCTGCAGAACAGCTAGCCCAACTGACGGGTGTGGCAGCAATTCTGAGATTTCCTTTGCCTCATCTTGATGACGTGCTGGTTTAA 1110 0.4847 MKLVDKNLAVNQAGTVKIIPEEPDDLWVVYNLIARGDVIAADTTRKVHLVSTKNTASRVKLTLPIKVTCLHFHKDSSTVRVQGRNMEANQYVAAGSFHTLTLERNKGFELTKKIWDSAALDALTETSEKLSGADLAVLLLQQGQAQVYLVGKGLTTLCSKIEASPARRRGTSNVFFQDVFSAFVKHVDFNTVKSVVIASAGSTKDEFRRFMLSEAKRSKMKSIEDNKSRIIVAAMSPGSKGELKEVLNDNAVMNMIKDSKVVMEIKTMRELWDMLFLSNSGRACYGPKNVEAAQEMKAIETLLITDDLYRNADIKTRQKYMGLVKSVKEGGGKALVYSSMHVSAEQLAQLTGVAAILRFPLPHLDDVLV 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2698 369 SUPERFAMILY Dom34/Pelota N-terminal domain-like 1 126 IPR038069 -
Glsi02g2698 369 SMART eRF1_1_2 1 128 IPR005140 -
Glsi02g2698 369 SUPERFAMILY Translational machinery components 132 260 - -
Glsi02g2698 369 Pfam eRF1 domain 3 262 361 IPR005142 -
Glsi02g2698 369 Pfam eRF1 domain 2 135 258 IPR005141 -
Glsi02g2698 369 Gene3D Pelota, domain A 1 129 IPR038069 -
Glsi02g2698 369 Gene3D eRF1 domain 2 133 256 IPR042226 -
Glsi02g2698 369 NCBIfam mRNA surveillance protein pelota 1 361 IPR004405 GO:0070481|GO:0070966|GO:0071025
Glsi02g2698 369 FunFam Protein pelota homolog 260 368 - -
Glsi02g2698 369 FunFam Protein pelota homolog 1 129 - -
Glsi02g2698 369 Gene3D - 258 367 IPR029064 -
Glsi02g2698 369 PANTHER PELOTA 1 368 IPR004405 GO:0070481|GO:0070966|GO:0071025
Glsi02g2698 369 SUPERFAMILY L30e-like 254 361 IPR029064 -
Glsi02g2698 369 Pfam eRF1 domain 1 1 125 IPR005140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2698 Glsi-ChrGlsi02 76474567 76475676 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2698 02 76474567 76475676 Glsi02g2698 02 76474567 76475676 ECH