Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2589 ATGGGTGTCCCAAAGTGTCTTGCAGTCTCTGTATTAGTTTGCTTCCTTTATGTGCTTAATAACAATGCAGTTGAAGCGTTTCACCAAATACACCCACATCTTCAATCCGTCTTAGCGGTTGAGGTGAAGCAACTACACAGAACTGGATACCATTTTCAACCTCCTAGGAACTGGATCAACGGACCCTTGTACTATAATGGATACTACCATCTATTCTATCAGTACAATCCAAAGGGATCAGTGTGGGGCAACATTGTGTGGGCCCACTCAGTATCAAAGGACCTTATCAACTGGGAAGCACTTGAACCTGCCATTTACCCATCCAAACCGTTTGACAAGTACGGGTGTTGGTCTGGATCAGCCACCGTCGTCCCGGGTAAAGGACCCGTAATCCTCTACACTGGAATTGTTGATGACAAACAAACTCAGGTCCAATGCTACGCAGTACCCGAGAACGTGTCCGACCCACTACTCAGAAAATGGGTAAAGCCCGATTCCATCAACCCGATAGTGGTTGCGAATCAAGGCGTGAACGGCAGCGCGTTCCGTGACCCAACAACGGCTTGGTGGAGCGAGAAGGACAAGCACTGGAGGATTTTGGTGGGTAGCAGAAGGAAGCACAGAGGGGTAGCATACTTGTATAGAAGTAGGGACTTTGTGAAGTGGGTGAAGGCCAAACACCCGATCCATTCTAAAAGCACGACGGGTATGTGGGAATGCCCGGACTTTTACCCGGTTTCTTTGACGGGGAAAGAGGGGTTGGACACATCGGTTGTTGGGAATCATGCGAAGCATGTGCTGAAGAATAGCCTTGACTTAACCAGGTTTGAGTACTATACAGTGGGAAAATATATCCAGGAGACGGATAAGTATATCCCGGATAACACTTCAGAGGATGGATGGGGTGGCCTCAGATATGATTACGGTAACTTTTATGCTTCCAAGTCATTCTTTGACCCCAGCAAGAACCGAAGGATCATATGGGGTTGGGCAAACGAGTCCGATTCTAAGGAAGACGATGTTCACAAAGGATGGGCAGGAATTCAGGCAATACCAAGAACAGTGTGGCTTGATTCAAGTGGGAAACAATTGGTACAATGGCCCGTTGAGGAGTTAAATACTCTAAGAGGCCAAGAGGTTAAGATGAGCAATAAAAGGCTTCAAAAGGGAGAATATGATGAAGTAAAAGGAATTACTGCTGCGCAGGCTGATGTCGAAGTTACCTTGTCATTTTCAAGCTTGGACAAGGCAGAGCCGTTTGACCCTAGCTGGGTGAACGCAGAGGATCTTTGTGGGCAAAAGGGGTCAAGTGTTGAAGGTGGAGTTGGACCATTTGGGCTTCTGACATTGGCTTCCGAAAAGCTAGAAGAGTTTACTCCAGTGTTCTTCCGAATTTTCAAAGCTCCAAACAAGCATGTGGTCCTGCTGTGCGCTGACGCAAGCAGTTCCTCTTTGAAGAGTGAGTTGTACAAGCCATCATTTGCTGGCTTCGTAGACGTGGATTTAGCCGACAAGAAGCTTTCTCTTAGGAGTTTGATTGATCACTCCGTAGTGGAAAGTTTTGGAGCAGGAGGGAAAACAAACATATTAGCAAGGGTTTATCCAAAGTTAGCAGTGATGAATGCAGCTCACCTGTTTGTGTTCAACAACGGTACCGAGCCAATCACCGTGGAGAATCTGAGCGCATGGAGCATGAAATCTGCTGTTATAACCTGA 1716 0.4691 MGVPKCLAVSVLVCFLYVLNNNAVEAFHQIHPHLQSVLAVEVKQLHRTGYHFQPPRNWINGPLYYNGYYHLFYQYNPKGSVWGNIVWAHSVSKDLINWEALEPAIYPSKPFDKYGCWSGSATVVPGKGPVILYTGIVDDKQTQVQCYAVPENVSDPLLRKWVKPDSINPIVVANQGVNGSAFRDPTTAWWSEKDKHWRILVGSRRKHRGVAYLYRSRDFVKWVKAKHPIHSKSTTGMWECPDFYPVSLTGKEGLDTSVVGNHAKHVLKNSLDLTRFEYYTVGKYIQETDKYIPDNTSEDGWGGLRYDYGNFYASKSFFDPSKNRRIIWGWANESDSKEDDVHKGWAGIQAIPRTVWLDSSGKQLVQWPVEELNTLRGQEVKMSNKRLQKGEYDEVKGITAAQADVEVTLSFSSLDKAEPFDPSWVNAEDLCGQKGSSVEGGVGPFGLLTLASEKLEEFTPVFFRIFKAPNKHVVLLCADASSSSLKSELYKPSFAGFVDVDLADKKLSLRSLIDHSVVESFGAGGKTNILARVYPKLAVMNAAHLFVFNNGTEPITVENLSAWSMKSAVIT 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2589 571 CDD GH32_Fruct1-like 57 357 - -
Glsi02g2589 571 SMART glyco_32 51 525 IPR001362 GO:0004553|GO:0005975
Glsi02g2589 571 Gene3D - 382 565 - -
Glsi02g2589 571 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 55 380 - -
Glsi02g2589 571 Gene3D Glycosyl hydrolase domain; family 43 56 381 IPR023296 -
Glsi02g2589 571 Pfam Glycosyl hydrolases family 32 N-terminal domain 51 368 IPR013148 -
Glsi02g2589 571 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 380 565 - -
Glsi02g2589 571 SUPERFAMILY Arabinanase/levansucrase/invertase 42 369 IPR023296 -
Glsi02g2589 571 Pfam Glycosyl hydrolases family 32 C terminal 371 564 IPR013189 -
Glsi02g2589 571 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 38 568 - -
Glsi02g2589 571 SUPERFAMILY Concanavalin A-like lectins/glucanases 368 568 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2589 Glsi-ChrGlsi02 75699906 75704187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2589 20 565 Glycoside Hydrolase AT2G36190 65.062 0.0 739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2589 02 75699906 75704187 Glsi02g2589 02 75699906 75704187 ECH