Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2582 ATGCAAGACCATGTAGAGGTAAAACCAGGCGTCCCCACCTACGTAGCTCAGTGGCCAATCTACGCGCTAGCATGGTCGATACGTCGCGACAAAAATACCCGCCTCGCCATTGGGAGTTTCATAGAAGACTACACGAACAAGGTTGAACTAGTCCACTTCAATTATGAGACATTCAATTTCACCACTGACCCTCGTCTGGTGTTTGACCACCCTTATGCACCAACCAACATCATGTTCTTCCCCTCCGAGGACGACACGAATCCTGACATCGTCGCCAGCTCTGGTGACTACCTAAGACTCTGGGAAATCCACGACGATCGGATCGAGCTCAAGTCCCTCCTAAATGGTAACAGAGTTAGAGATAGATCGGCCATAACCTCCTTTGATTGGGCCGAGTTCGATACTGGTCGTCTGGCTACTTCAAGCGTAGACACTACATGTACCGTATGGGACATAGAGAGGGAGGCCGTGGACACACAATTAGTGGCACATGACAAAGAAGTGTACGACATATCATGGGGTGGTTTTAATGTTTTTGCTTCAGTGTCTGGGGATGGTTCTGTTAGGGTTTTCGATTTAAGGGATAAGGAGAAATCGACCATAATATATGAAAATCCGGTGCAAGATTGTCCCTTGCTACGTTTGGAATGGAATAAAGGTGACCCCAGGTTTATAGCCACGGTCGGAATGGACAGTAATAAAGTGGTAATAATGGATATCAGGCTACCGACCACGCCTTTGATGGAATTAAGTAAGCATAAGGGAAGTGTTAATGCTATATCGTGGTCACCACTTATGGGACGGCAGCTGTGCTCTTGCAGTGATGATTCAAGGGCTTTGATTTGGGAGGTGGTGGGAACTGGGCATCAACCAAGGAATGGTGGTGATGATGTGAAACCTGAGATGTGGTATGAATCAACAGCTGAAATCAATCAAGTCCGTTGGTCTCCAATCCAGATAGATTCGGTTGCGCTTGCTTTGCTGAATATGTTACAACTTTTGAAGGTGTAG 1011 0.4679 MQDHVEVKPGVPTYVAQWPIYALAWSIRRDKNTRLAIGSFIEDYTNKVELVHFNYETFNFTTDPRLVFDHPYAPTNIMFFPSEDDTNPDIVASSGDYLRLWEIHDDRIELKSLLNGNRVRDRSAITSFDWAEFDTGRLATSSVDTTCTVWDIEREAVDTQLVAHDKEVYDISWGGFNVFASVSGDGSVRVFDLRDKEKSTIIYENPVQDCPLLRLEWNKGDPRFIATVGMDSNKVVIMDIRLPTTPLMELSKHKGSVNAISWSPLMGRQLCSCSDDSRALIWEVVGTGHQPRNGGDDVKPEMWYESTAEINQVRWSPIQIDSVALALLNMLQLLKV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2582 336 PANTHER WD REPEAT CONTAINING PROTEIN 8 336 IPR045159 -
Glsi02g2582 336 ProSiteProfiles Trp-Asp (WD) repeats profile. 161 201 IPR001680 GO:0005515
Glsi02g2582 336 ProSiteProfiles Trp-Asp (WD) repeats profile. 250 284 IPR001680 GO:0005515
Glsi02g2582 336 SUPERFAMILY WD40 repeat-like 19 290 IPR036322 GO:0005515
Glsi02g2582 336 Gene3D - 11 328 IPR015943 GO:0005515
Glsi02g2582 336 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 250 284 - -
Glsi02g2582 336 SMART WD40_4 115 151 IPR001680 GO:0005515
Glsi02g2582 336 SMART WD40_4 243 283 IPR001680 GO:0005515
Glsi02g2582 336 SMART WD40_4 154 192 IPR001680 GO:0005515
Glsi02g2582 336 SMART WD40_4 61 102 IPR001680 GO:0005515
Glsi02g2582 336 SMART WD40_4 198 239 IPR001680 GO:0005515
Glsi02g2582 336 Pfam WD domain, G-beta repeat 161 192 IPR001680 GO:0005515
Glsi02g2582 336 Pfam WD domain, G-beta repeat 246 282 IPR001680 GO:0005515
Glsi02g2582 336 ProSitePatterns Trp-Asp (WD) repeats signature. 270 284 IPR019775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2582 Glsi-ChrGlsi02 75641299 75642309 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2582 02 75641299 75642309 Glsi02g2582 02 75641299 75642309 ECH