Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2558 ATGACGCTTGGCTCAGGAGGATCGAGTGTCGTGGTACCAAGGAACTTCAGATTGCTGGAGGAACTTGAACGGGGAGAAAAAGGTATAGGAGATGGCACAGTTAGCTATGGAATGGATGATGGTGATGACATTTACATGCGGTCTTGGACTGGCACCATTATTGGTCCCCATAATACTGTACATGAAGGTAGAATTTATCAATTGAAGCTGTTCTGTGATAAAGATTACCCAGAGAAGCCCCCAAGTGTTCGGTTTCATTCAAGGATCAATATTACTTGTGTTAATCATGAAACTGGAGTGGTTGAACCAAAGAAATTCGGTCTTCTTGCTAATTGGCAACGAGAGTACACTATGGAGGACATACTGACCCAGCTCAAAAAGGAAATGGCAGCTCCACATAACCGGAAGCTTGTCCAGCCTCCAGAAGGTACCTACTTTTAG 441 0.4422 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINITCVNHETGVVEPKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2558 146 SUPERFAMILY UBC-like 11 146 IPR016135 -
Glsi02g2558 146 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 46 134 - -
Glsi02g2558 146 Pfam Ubiquitin-conjugating enzyme 43 136 IPR000608 -
Glsi02g2558 146 SMART ubc_7 16 144 - -
Glsi02g2558 146 Gene3D Ubiquitin Conjugating Enzyme 4 146 IPR016135 -
Glsi02g2558 146 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 13 146 IPR000608 -
Glsi02g2558 146 FunFam Ubiquitin-conjugating enzyme E2 variant 1C 4 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2558 Glsi-ChrGlsi02 75330887 75333780 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2558 02 75330887 75333780 Glsi02g2558 02 75330887 75333780 ECH