Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2522 ATGGATCCAGCGCAGACACCTCTTGGCCAAATGCTCTTGGACCAGATCACTCCAGTTGTCATGGTCCTTTCTACTCCTCTAGCCGAAGAGGCTTGCCTCAAGAATGGCCTCAGCTTCCTTCAGACGCTGACCCCATTCTGCTCCTTTAATAACATCGATGTGCCAGTGAGGACAGCCAGTGACCAGCCCTATAGGCTTCAGAAGTTCAAATTGCGGTTGTATTATGCTTCGGATGTCAGGAAGCCAGATTTGGAGGTAGCTAAAGAGCATTTGAAGCAAGTTATCACAGAGGCAGGGGAGAAAGAGCTTTCAGAGTTGTGTTTGGATGCACCAGAAATTAATCATGTACTTGAGAGCTCTGAATCTGGAAATACACCATCATGGCTTCAGTTTTTTAATAAAGAACTTATACGCATGGCATCCTTTTCAGACCATGAAGCTTTTGATCATCCTGTGGCATGTCTTTTGGCTGTTTCTTCTAAGGACGAACAACCTATTAACAGATTTGTTGACCTTTTTAACACTAACAAGCTACCTTCCCTTCTGAATGATGGTGTGATGGATCCAAAGATTTTGAAGCATTATTTATTAATGCATGATAATCAGGATGGCCCTGCAGAGAGAGCAATTAAAATATTGACAGAAATGAGGAGTACATTTGGTGCTAGTGACTGTGCGTTGCTTTGCATTAATTCTTCACCAGATGCTCCAATCAAACATGAAGAGAACCCTTGGGTTTTATATAATTCTGATGTCTCTTCTGGTCAAGATATTGGTTGCTTTCTTAACATTGATGATATCAATAAGATAAAAGATCTCATGCAAGATATATCATCAAAGCACATCATTCCAAACATGGAGCAAAAGATTCGCATGCTCAATCACCAAGTTAGTGCAACACGAAAAGGGTTTAGAAACCAAATTAAAAATTTATGGTGGAGAAAAGGAAAAGAAGACGGTGTAGATTCTGTTCATGGTCCTACGTATACCTTTAGCTCCATTGAATCCCAAATTCGAGTTTTGGGTGATTATGCTTTCATGTTAGGAGATTATGAACTTGCCTTGTCAAATTATCGCTTAATTTCCACAGATTACAAGCTTGACAAAGCTTGGAAACGCTATGCTGCTGTGCAGGAAATGATGGGACTTACATATTTCATGTTGGATCAGTCAAGAAAGGAAGCTGAATATTGCATGGAAAATGCTTTTAACACTTATTTAAAACTTGGATCATCTGGTCAGCAAAATGCCACACGATGTGGTCTCTGGTGGATAGAAATGTTGAAGACACGAGATCTATATAAGGAGGCTGCACCTGTTTATTTCCGCATTTGCGGTGAGGATATTTTACATTCTGCTGTTATGCTTGAACAAGCATCCTACTGCTACCTGTTGTCCAAACCTTCTATGTTACGTAAATTTGGATTTCATCTTGTGCTTTCTGGTGATCGTTATAAAAGTTGTGATCAGATCAAACATGCAATTCGAACATACAGAAGTGTTCTTTCTGTTTTTAGGGGAACTACATGGAGTTATATCAAAGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTCTCTTGGAATGTCTGATGTGGCTGTGAAGCATATGTTGGAAATTTTGGCTTGTGGTCACCAGTCCAAGACAACACAGGAGTTAATTTTGGGTGATTTTCTTCAAATTGTTCAGAAAACAGGACAAACATTTGAGGTATCAAAACTTCAGTTGCCTGTCATCAACATTTCTTCCCTCAAGGTCATCTTTGAAGACCACCGAACTTTTGGATCACCTTCAGCGGTTAACACTAGAGAAGGTTTGTGGTGTTCCTTGGAGGAAGAAATGATATCATCTTTCTCTGCTGCTAAGACTAATTGGTTGGAGTTGCAATCAAAGCTTGTCTCAAAAAAGTACAGCGAATCAAATGTTTGTGTTGCGGGAGAAGCTGTGAAGGTGAATATTGAATTCAAAAACCCTCTGCAAATCTCAATTCCCATATCTGGGGTTACCCTTATATGCAAACATTCTCCTAGTACTGGTGAAGGTACATCAGACGAAAATAAATTAAGCATGGAGAAAGATAACGATGGTAAAGTCGAAGAGTTGACAGCCAGCAGGGATATGAGCTCTGACAATTCTTCATTTTTGGCGTCTGAGGTTGATTTCTTATTAGGAGGTGGTGAAACAACCATGGTGCAACTATCAGTGACTCCTAGACTGGAAGGTTCTCTGGAAATTCTTGGAGTTAGGTGGAAATTATCGGGTACAATAGTTGGCTTCCACAACTTCGAGTTTAGTCATGTAAAGAAGAATATTTTAAAAGGAAAAAGAAAAGCGAAGTGCTCACCTAATGAAAACATGAAGTTTTTGGTGATTAAGAGCATACCCAAACTTCAAGGGTCTATTGACCCCTTCCCTGAAAAGGCATATGCTGGAGATTTACGGCAACTTGCTTTGGAGTTGAGGAACCCATCAGAGTTTCCTGTTAAGAATCTGAAGATGAAAATAAGTCATCCTAGATTCCTGAATATTGGGAATCAGGAAAATATAAAGTCAGAGTTTCCTGCTTGCTTGATGAAGAAGATAGATTCAGTATTAAGTGGCCCACACGCTAATCCTAATAACATGTCTGACACAGTCTTTCTGTTTCCAGAGGGCACTTCAGTTCAAGGTGTAATACCCTTCTCATGGCCTCTTTGGTTTAGGGCTGCTGTTCCTGGTGATATTTCTCTTTACATAAGCATATATTATGAAATGGGAGATATGTCAAGTATCATCAAATATCGTACTCTTCGCTTACAGTACAATGTGCAGGTATTGCCATCATTGGATGTGTCTTTTCAAATCAGTCCTTCTCCATTGAGATTACAAGAATTCCTCGTCCGAATGGATGTTGTTAACAAGACAACCTCAGAAAGTTTCCAAGTTAATCAGTTGTCATCTATTGGGAGCCACTGGGAAATATCATTACTTCAGCCACCTGATAGTATTTTTCCTTCACAATCATTGATGGCTGGTCAAGCAATATCGTGTTTCTTAATGCTAAAGAATTGCAGGAGACTACTGACTTCTGAGGACAACATATCTACCATCTCTGTGCCTGTCAGGAGTGATGTACATTTGGTTCCTCAAGGAAGTGAGGATCCAGTTTACAATATGAGCAGTGAGCCGTTGGTCAATTTCCACCATTGTGAAAGATTGCATCAGGAAATATCACATGAGGATCAGGGAGACCTGAACACTGTCGATTTTGTATTGTTCTCTCGGCCACTGCAGAGTAACAGTAATCCTGATTTTTCTGGCCCTCCTCATGTTATTACTGCAAGCACAGGCCCTATTTCATGGCTAGTGGACAGTCCTCGAACCTTACATCATAATTTCTCTACATCCTTCTGTGAAATAAATCTGAAGATGCATCTTTACAATTCCGCTAGTACCACTGCTTTTGTGCGCATTAACACCTTAGATTTTGTTGGTAATGGCGGACATCTGAACACTGTGAACGTGGTTCAATCAACAACTTTTGATAACCAAGCAGGGTGGCATGATGTCACAGCAGCCAATGAAGTTAAAGTCACATCAAATGATATCGGGACCCATCATGGAAAGGCTTTATCATTAGAAAGTGTCTCCCCATTCATTTGGTCTGGATCAAGCTCTACCAATGTCCACCTTGAGCCTATGTCCTCAGCCGAAATTCCTCTTCAGATCTGTGTGTTCTCTCCTGGGATATATGATCTGTCAAATTACATTTTGCATTGGAATCTTCTCCCATCTGAAGGTCGGGGAGTTCAAGATGAAAAGAGTAAGCCTTCAGGAAAGTGCTCAGGATACACCTACTATCTTACTGTGCTTCAATCCAGTTGA 3867 0.4039 MDPAQTPLGQMLLDQITPVVMVLSTPLAEEACLKNGLSFLQTLTPFCSFNNIDVPVRTASDQPYRLQKFKLRLYYASDVRKPDLEVAKEHLKQVITEAGEKELSELCLDAPEINHVLESSESGNTPSWLQFFNKELIRMASFSDHEAFDHPVACLLAVSSKDEQPINRFVDLFNTNKLPSLLNDGVMDPKILKHYLLMHDNQDGPAERAIKILTEMRSTFGASDCALLCINSSPDAPIKHEENPWVLYNSDVSSGQDIGCFLNIDDINKIKDLMQDISSKHIIPNMEQKIRMLNHQVSATRKGFRNQIKNLWWRKGKEDGVDSVHGPTYTFSSIESQIRVLGDYAFMLGDYELALSNYRLISTDYKLDKAWKRYAAVQEMMGLTYFMLDQSRKEAEYCMENAFNTYLKLGSSGQQNATRCGLWWIEMLKTRDLYKEAAPVYFRICGEDILHSAVMLEQASYCYLLSKPSMLRKFGFHLVLSGDRYKSCDQIKHAIRTYRSVLSVFRGTTWSYIKDHVHFHIGQWYASLGMSDVAVKHMLEILACGHQSKTTQELILGDFLQIVQKTGQTFEVSKLQLPVINISSLKVIFEDHRTFGSPSAVNTREGLWCSLEEEMISSFSAAKTNWLELQSKLVSKKYSESNVCVAGEAVKVNIEFKNPLQISIPISGVTLICKHSPSTGEGTSDENKLSMEKDNDGKVEELTASRDMSSDNSSFLASEVDFLLGGGETTMVQLSVTPRLEGSLEILGVRWKLSGTIVGFHNFEFSHVKKNILKGKRKAKCSPNENMKFLVIKSIPKLQGSIDPFPEKAYAGDLRQLALELRNPSEFPVKNLKMKISHPRFLNIGNQENIKSEFPACLMKKIDSVLSGPHANPNNMSDTVFLFPEGTSVQGVIPFSWPLWFRAAVPGDISLYISIYYEMGDMSSIIKYRTLRLQYNVQVLPSLDVSFQISPSPLRLQEFLVRMDVVNKTTSESFQVNQLSSIGSHWEISLLQPPDSIFPSQSLMAGQAISCFLMLKNCRRLLTSEDNISTISVPVRSDVHLVPQGSEDPVYNMSSEPLVNFHHCERLHQEISHEDQGDLNTVDFVLFSRPLQSNSNPDFSGPPHVITASTGPISWLVDSPRTLHHNFSTSFCEINLKMHLYNSASTTAFVRINTLDFVGNGGHLNTVNVVQSTTFDNQAGWHDVTAANEVKVTSNDIGTHHGKALSLESVSPFIWSGSSSTNVHLEPMSSAEIPLQICVFSPGIYDLSNYILHWNLLPSEGRGVQDEKSKPSGKCSGYTYYLTVLQSS 1288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2522 1288 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 166 518 IPR024420 -
Glsi02g2522 1288 SUPERFAMILY TPR-like 341 548 IPR011990 GO:0005515
Glsi02g2522 1288 PANTHER TRANSPORT PROTEIN TRAPP 3 1287 IPR024420 -
Glsi02g2522 1288 MobiDBLite consensus disorder prediction 677 698 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2522 02 75047483 75070754 Glsi02g2522 02 75047483 75070754 ECH