Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2481 ATGGAGAATCAGCCGGGAAGGGTTATTGATTTTCAGAAATTTACATGGAAAATTCAAGATTTGTCAAAAAGGAAAACCAAGGAACAAGGGTCCGAGTCTTTTAAAGTTGGCGATGTTAGATGGCGAATCGTTGTACATCAAATAGGAAAGGGTGGGGAGCAATATTTGTACTTGATTTTGAAGGTTGCAGATACTTTATTACCATCGTATAGATGGAGAACATTTGCGCATATCAAGTTGGCTCTTATTAATCAGAAGGATAGCCTCTTGTCCATTGCAAAAGAGACTCGGAAGAAGTTCAATGCAGGATATAAAGCCTGGGGTTCATCATTCGTGCATCTCAGTGACTTCTATGATACTACAAAAGGCTATCTTGTGAACAATGCATGCATCATAGAAGCCCAAGTATCCGTCTCTGATGTTCCTTTTGAAATTGAAGACAACTTGACGACACAAAGTATTACCCAAACCCATGAATTTAAAGGTGGACAATCAGAAATGCAGAAACCCTTACGGCTTCAAGATCAAGGAATAGATTCCTCGGATGACGCATTGAGTTTCACATCCCATGATTCGCTATGGAATCACACTAGTCAAACTGAACTAGAACTCCTCCAGCAGGAAGATGAAGGTATTATAGGGCCTTCAGATGAGACACCAAATCCTAAACAAGTACACTGTGTACCGACCGCTCCCCCTTTGTATCCTTCTATTTATGATGAACCTGAGGAATTAAAGCCATTAACCCCTCTTCGGGAGATTATAGATTTTAAGAGTTTAGGGCCTGAAGAAGTAGCTTTTGTTCCATTATTGGAGGAGGTCTGTTCATGGCATCCGTCACTGATAGAGAGCCAGAGGAAAAGAAGTCCAAAGTTCTCCCACTGGGCGTTCATGGCTTTGGGTCAAGTTTTATATTTCCTTGACACTATGAAGGTGAAAAACATAAGAGAAGAAACTGCCTATAAGCACCTCCAAAATTTATGGGAGGAACTTCAATTCTTTAAATTTGACTTGAGTTGGCTGGAGCCTCATGTTGAATCTGCGTTGAGTATAAAAGCGTATATGGAAAGAGAAGAGCAAGTGAGAAAACTAAAGGACGAGGTGGCTGCTTTAGAGATTGAAATGAAGAAACTGAGGGCAAATTTAGCTGAAGCAGAAGTTGACCTTAATATAGAAAGGAGACACTTGGCAGAAGAAGAAAGGGGTTTTGAGGAGAGAGACATGGATGCTCAACTAGGCTATGGCATATTTTAG 1254 0.4067 MENQPGRVIDFQKFTWKIQDLSKRKTKEQGSESFKVGDVRWRIVVHQIGKGGEQYLYLILKVADTLLPSYRWRTFAHIKLALINQKDSLLSIAKETRKKFNAGYKAWGSSFVHLSDFYDTTKGYLVNNACIIEAQVSVSDVPFEIEDNLTTQSITQTHEFKGGQSEMQKPLRLQDQGIDSSDDALSFTSHDSLWNHTSQTELELLQQEDEGIIGPSDETPNPKQVHCVPTAPPLYPSIYDEPEELKPLTPLREIIDFKSLGPEEVAFVPLLEEVCSWHPSLIESQRKRSPKFSHWAFMALGQVLYFLDTMKVKNIREETAYKHLQNLWEELQFFKFDLSWLEPHVESALSIKAYMEREEQVRKLKDEVAALEIEMKKLRANLAEAEVDLNIERRHLAEEERGFEERDMDAQLGYGIF 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2481 417 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 391 - -
Glsi02g2481 417 SMART math_3 13 117 IPR002083 GO:0005515
Glsi02g2481 417 Pfam MATH domain 19 138 IPR002083 GO:0005515
Glsi02g2481 417 CDD MATH 13 136 IPR002083 GO:0005515
Glsi02g2481 417 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 10 157 IPR008974 GO:0005515
Glsi02g2481 417 ProSiteProfiles MATH/TRAF domain profile. 11 136 IPR002083 GO:0005515
Glsi02g2481 417 SUPERFAMILY TRAF domain-like 13 143 - -
Glsi02g2481 417 Coils Coil 354 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2481 Glsi-ChrGlsi02 74738245 74739820 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2481 02 74738245 74739820 Glsi02g2481 02 74738245 74739820 ECH