Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2439 ATGGAGGAAGAAGAAGACCGGCAGAAGATTGCAGATCTGGTCAAGGAACTTGTACTTCGCTTACTTTCTCAAAATTACACCCCCGATTCACAACTCCAAAACCCTAACTCGCCCGACTTTCAAAACTCCCTTCGCTATGCAATTCGCATACTCTCCAGCAGACTGACACCCTCCATTGCTTCCGACTCTGCCGCCATCGCTGAGTCCATCAAGCGCCGCCTCGCCACTCAAGGTAGGTCAGCTGAAGCCCTCACTTTTGCCGACCTTTACACTAAATTCGCTTCAAGAACCGGGCCTGGGAGTGTAAATAACAAATGGGCTGTTATTTATTTGCTCAAAATTATAGCCGAAGATCGGAAAAATGTGCGAAGTCAATTAGATACTTCGGTTTTGTTGCCAAATTTGGCTTTTGCTGACAGTGAGTCGGGTAAGGATTCTAGGATTTTGCACAGCCGTGCCCAGGGGAAGGGATGGAATAATGGGGTTTTGTTGATTACCAAGGATCCGGATAATCGTCGCGATATTGCCTTTCGAGAGTTTGTAAAGTTAGTTACAGAAGAAAATGAGGTCGCTGAAGGGGTTTTGGTTCGAGATGTGTTGTATGCCTGTCAAGGAGTTGATGGGAAGTATGTGAAATTTGATAATAAGGTTGATGGGTTTGCCTTGTCAGATTTGATCAAGGTACCTAGAGCTACTAGGATTATGGTTCACAGACTTTGTGAACTGGGCGGGCTGTTTAAAAAGGTTACAGGATACATATTGCAGAGTTTGGATCGATTTCCCGCAGAAGATATAGGAACTGTTGGGCAGGCGTTTTGTGCTGCATTGCAAGACGAGCTCACAGAGTACTATAAGTTGTTGGCGGTGCTTGAAGCACAATCTTTAAATCCTATTCCATTAGTATCAGAATCAGCAAATTATCTTTCACTCAGGAGATTAGCTGTTTGGCTAGCGGAGCCAATGGTAAAAATGAGGTTAATGGCTGATTTGGTTGATAGGTGTAGGGTTTTGAGGGGTGGGGCGATGGCGGGTGCAATTCATTTACATGCCCAACATGGTGATCCGCTAGTTCATGAATTCATGAGGAGATTATTGCAGCGAGTGTGTTCTCCACTTTTTGAAATGGTGAGAAGATGGGTTCTGGAAGGGGAATTAGAAGATATCTTTGCTGAATTCTTTATTGTGGGTCAGCAGGTGAAAGTTGAATCCCTTTGGAGAGAAGGTTACAGGCTCCATGTTGCCATGCTTCCTTCATTTATTTCACCTTCTCTCGCTCAGCGTATCTTAAGGACTGGTAAGTCCATAAATTTTCTTTGTGTTTGTTGTGAGGATCGTGGTTGGGCTGATGCAGCAACAGATGCTGCCATTGCTATGGGGGCCACAACAAGAAGAGGTGGTTTTGGCTATGGTGAAACTGATGCTCTCGAGTCATTGGTTGATGAAGCAGCACAAAGGATTGATAAGCATTTGCTGGATGTAATGTACAAAAGGTACAAATTCAAAGAACACTGTCTTGCAATTAAGCGGTATTTACTGCTGGGTCAAGGTGATTTTGTTCAATATCTAATGGATATTGTTGGGCCTGAACTTTCTGAACCTGCTAACACTATAAGCTCTTTTAAACTTGCTGGATTGCTGGAAACTGCAATTCGATCATCCAATGCTCAATATGATGATCCTGACATATTGGATAGGCTAAGGGTCAAAATGATGCCACATGAAAGTGGTGATAGGGGCTGGGATGTATTTTCGCTGGACTATGATGCAAGAGTTCCACTAGATACTGTGTTCACAGAGTCTGTGATGTCAAGGTATTTGAGAATTTTTAATTTTCTGTGGAAGCTTAAAAGAGTGGAACATGCACTTATTGGTGCCTGGAAGACCATGAAACCAAATTGTATTACTTCTCATTCCTTTACCAAGCTGCAACATGCAGTTAAGTTGCAGTTAGTTTCAACATTGAGGCGGTGCCAGGTTCTTTGGGTCGAGATAAATCACTTTATTTCAAACTTGCAATATTATATCATGTTTGAAGTCTTGGAGGTATCGTGGTCAGATTTTTCAAATGCAATGGATATAGCCAAGGATCTTGATGACCTTCTTGCAGCCCATGAGAAGTATCTAAATTCGATAGTAGAGAAGTCTCTCCTTGGAGAGCGTTCCCACTCCCTTTACAAGTCACTACTTGTGATCTTTGATCTTATATTACGATTCCGGAGTCATGCAGATAGGTTGTATGAAGGCATCCATGAGTTGCAAGCAAGAATCAGAGAGTCTTCCCTATCTTCTCGAGATCAGAATAAATCACGAAATAAATTGAATGACAAGTCTTTCGAACATGGATCTTGGACTGCTGATGGCAGGAAAGCCCTAACGCAACGTGCTGGTGAATTTCTTCAAAATGTGGGACAAGATCTGGATGCGATTGCTAAGGAGTATTCATCATTGCAAGAGGAGTTCATATCTCAGTTGCCTGTTCAGCAGCATGTTGATCTTAAATTCCTCTTTTTCCGTCTTGACTTCAATGAATTTTATAGGCGGTTGTGTCCCAGCATATAA 2559 0.4271 MEEEEDRQKIADLVKELVLRLLSQNYTPDSQLQNPNSPDFQNSLRYAIRILSSRLTPSIASDSAAIAESIKRRLATQGRSAEALTFADLYTKFASRTGPGSVNNKWAVIYLLKIIAEDRKNVRSQLDTSVLLPNLAFADSESGKDSRILHSRAQGKGWNNGVLLITKDPDNRRDIAFREFVKLVTEENEVAEGVLVRDVLYACQGVDGKYVKFDNKVDGFALSDLIKVPRATRIMVHRLCELGGLFKKVTGYILQSLDRFPAEDIGTVGQAFCAALQDELTEYYKLLAVLEAQSLNPIPLVSESANYLSLRRLAVWLAEPMVKMRLMADLVDRCRVLRGGAMAGAIHLHAQHGDPLVHEFMRRLLQRVCSPLFEMVRRWVLEGELEDIFAEFFIVGQQVKVESLWREGYRLHVAMLPSFISPSLAQRILRTGKSINFLCVCCEDRGWADAATDAAIAMGATTRRGGFGYGETDALESLVDEAAQRIDKHLLDVMYKRYKFKEHCLAIKRYLLLGQGDFVQYLMDIVGPELSEPANTISSFKLAGLLETAIRSSNAQYDDPDILDRLRVKMMPHESGDRGWDVFSLDYDARVPLDTVFTESVMSRYLRIFNFLWKLKRVEHALIGAWKTMKPNCITSHSFTKLQHAVKLQLVSTLRRCQVLWVEINHFISNLQYYIMFEVLEVSWSDFSNAMDIAKDLDDLLAAHEKYLNSIVEKSLLGERSHSLYKSLLVIFDLILRFRSHADRLYEGIHELQARIRESSLSSRDQNKSRNKLNDKSFEHGSWTADGRKALTQRAGEFLQNVGQDLDAIAKEYSSLQEEFISQLPVQQHVDLKFLFFRLDFNEFYRRLCPSI 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2439 852 Coils Coil 799 819 - -
Glsi02g2439 852 Coils Coil 273 293 - -
Glsi02g2439 852 Gene3D - 501 844 IPR042241 -
Glsi02g2439 852 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 85 845 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Glsi02g2439 852 Pfam Gamma tubulin complex component N-terminal 196 496 IPR041470 -
Glsi02g2439 852 Pfam Gamma tubulin complex component C-terminal 502 845 IPR040457 GO:0043015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2439 Glsi-ChrGlsi02 74430464 74433155 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2439 02 74430464 74433155 Glsi02g2439 02 74430464 74433155 ECH