Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2417 ATGCAAAACAAGGGACTTTGGTTTATTTTTATCGGCCACTCTCTCCTGAGCGCAGGGAGAGGAGAGAAGTTTCAAAGGTTCTTGGTTTCCTCTTCGGTTTCAGATTGCGTGAAAATGGGAGCCGGTGGCCGAACTTCCGTTCCTCCAGCCCAGAGAAAGTCCGAGGCCGAATCTCTGAAGCGAAGCCCAACCGATAAACCCCCATTCAGTCTCGGCCAGATCAAGAAAGCCATCCCACCACACTGTTTCCAGCGCTCTGTTCTGCGGTCATTCTCCTACGTCGTTTATGACCTTGCCATAGCCTTCTGCCTCTATTATGTCGCCACCCATTACTTCCACAACCTTCCTCGCCCTTTGTCTTTCTTGGCCTGGCCAATTTACTGGGCAATCCAAGGCTGCGTCCTTACCGGCGTTTGGGTTATCGCACACGAGTGTGGCCATCACGCATTCAGTGACTACCAATGGCTTGATGATACGGTTGGCCTCGTTCTCCACTCCTCTCTCCTAGTCCCATATTTTTCATGGAAATACAGTCATCGCCGCCACCACTCCAACACGGCCTCTCTTGAGCGCGATGAAGTATTTGTGCCAAAGCGAAAGTCCGGTATCAGTTGGTACTCCAAATACCTCAACAACCCACCAGGCCGACTCCTCACGCTCACTTTTACCCTCACTCTTGGCTGGCCTCTTTACCTAGCTTTCAACGTTTCGGGCAGGCCTTATGAACGCTTTGCTTGCCACTATGACCCATACGGTCCCATTTACTCAGATCGGGAACGACTTCAAATTTTCATATCAGATGTAGGATTAAGTGCAGTAGTCTATGGACTTTACCGTCTTACCCTGGCAAAAGGACTTGCCTGGGTTGTGTGTGTTTATGGAGTGCCACTGTTAGTGGTGAATGGATTCTTGGTGCTGATAACATATTTGCAGCACACTCACCCATCATTGCCACACTATGATTCTTCTGAGTGGGACTGGTTGAGAGGAGCCTTGGCTACCGTTGACAGAGATTATGGAATTTTGAACAAGGTTTTCCATAACATAACAGATACCCATGTGACGCATCACTTGTTCTCCACGATGCCACATTATCATGCAATGGAGGCTACAAAGGCAATCAAACCAATTTTGGGAGAGTATTATCAGTTCGATGGGACCTCCATTACCAGCGCAATGTGGAGAGAGGCAAAAGAGTGTATTTATGTAGAGCCAGATGAAGGAGCTCAGAGCAAAGGTGTATACTGGTACCAAAATAAGTTGTGA 1266 0.4842 MQNKGLWFIFIGHSLLSAGRGEKFQRFLVSSSVSDCVKMGAGGRTSVPPAQRKSEAESLKRSPTDKPPFSLGQIKKAIPPHCFQRSVLRSFSYVVYDLAIAFCLYYVATHYFHNLPRPLSFLAWPIYWAIQGCVLTGVWVIAHECGHHAFSDYQWLDDTVGLVLHSSLLVPYFSWKYSHRRHHSNTASLERDEVFVPKRKSGISWYSKYLNNPPGRLLTLTFTLTLGWPLYLAFNVSGRPYERFACHYDPYGPIYSDRERLQIFISDVGLSAVVYGLYRLTLAKGLAWVVCVYGVPLLVVNGFLVLITYLQHTHPSLPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVTHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTSITSAMWREAKECIYVEPDEGAQSKGVYWYQNKL 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2417 421 Pfam Domain of unknown function (DUF3474) 56 104 IPR021863 GO:0016717
Glsi02g2417 421 CDD Delta12-FADS-like 85 367 - -
Glsi02g2417 421 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 51 420 IPR012171 GO:0016491
Glsi02g2417 421 Pfam Fatty acid desaturase 123 383 IPR005804 GO:0006629
Glsi02g2417 421 MobiDBLite consensus disorder prediction 40 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2417 Glsi-ChrGlsi02 74299531 74303040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2417 39 421 Lipid Metabolism Gene Families AT3G12120 76.762 0.0 635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2417 02 74299531 74303040 Glsi02g2417 02 74299531 74303040 ECH