Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2333 ATGGGAACTGCACGCAGACAGTTGAAGGCTATGCTCTGGAAGAACTGGCTTCTCAAAATTCGTCATCCATTCGTTACTTGTGCCGAGATTTTACTCCCCACTGTTGTATTGTTGCTGTTAATAGTTGTAAGGACTCGGGTTGATACACAAATTCATCCAGCTCAACCGCATATTCAAAAAGGGATGTATGTGGAAGTGGGCAGGGGTATCTCCCCTAGCTTCCAACAAATTTTGGAACAATTATTGGCTAAGGGAGAGTATATAGCTTTTGCACCTGATACAAACGAGACTATGCGGATGATAGACCTAATGTCAATAAAATTCCCCCTCTTGAAGCTTGTGAGTAGAGTTTACAAAGATGAGGTAGAGCTGGAAACTTACATACGCTCAGATGTTTATGGTACCTGCAATCTAGCAAGAAATTGTTCAAATCCCAGAATCAAAGGAGCAGTTGTGTTTCATGAACAAGGTCCTCGGTCATTTGATTATAGCATACGCCTCAATCATACTTGGGCTTTCTCTGGTTTTCCCGATGTTAAAACCATAATGGACACAAATGGCCCTTTTCTCAACGACTTGGAACTTGGTGTTAGTGCTGTACCAACGATGCAATACAGCTTCAGTGGGTTTTTGACTCTGCAGCAACTGGTTGATTCGTTCATAATATTCGTTGCTCAGCAATCGAACATAAAGCCCACCTCTGAAAGTGTAGAGCATCCTCTGCCACGCTACAATGATACTGATTTTTCTTTGAAAATTCCATGGACTCAATTTAGCCCTGCTCATATTCGAATAGCTCCATTTCCCACTCGGGAGTACACTGATGACCAGTTCCAGTCAATCATAAAGAAATTCATGGGAATACTGTACTTATTGGGGTTTCTCTATCCAATTTCTCGGCTGATCAGTTATTCTGTGTTTGAGAAGGAACAGAAAATTAAGGAAGGACTCTACATGATGGGTCTCAAAGATGGTGTGTTCCATCTCTCTTGGTTTATAACATATGCTTTGCAGTTTGCAATTTCTTCTGGGATCATTACCGCTTGCACTATGGATAATTTATTCAAGTTTAGTGATAAGACACTGGTGTTTGCATATTTCTTCATTTTTGGGCTTAGCGCAATTATGCTGTCGTTTTTGATATCAACATTTTTCAAACGGGCCAAAACAGCTGTAGCAGTTGGAACCCTCTCTTTTCTTGGTGCCTTTTTCCCTTATTACACTGTGTATGATGAGGCGATCTCTATTGTCTGGAAGATTATTGCTTCCTTGCTTTCACCTACGGCTTTTGCTCTGGGGTCTATCAACTTTGCTGATTATGAGCGTGCTCATGTTGGACTTCGTTGGAGCAACATATGGAGGGAATCATCTGGAGTGAATTTTTTGGTCTGCCTTCTGATGATGCTACTTGATACACTGCTTTATTGTGCGATTGGTCTTTATCTTGATAAGGTTCTTCCAAGAGAGTATGGATTACGATATTCATGGAGCTTTATTTTCCACAAAGACTTTTGGAGGAAGAAAAAAATAGTAAAACATTGTTCCTCCAGTTGGGATATAAAAATTACTGATAAGATTTCAGAGTCAAATAGAAATTTTCGAGGGGAGAATACTTTCAAACCTGCTATAGAAGCAATTAGCTTGGACATGAAACAGCAAGAGCTTGATGGCAGGTGCATTCAGATTAGGAATTTGCGTAAAGTGTATGCTTCTAAAAAAGGGGATTGCTGTGCTGTTAACTCTTTAAGGCTTACGTTGTATGAAAATCAAATTCTTGCTCTTCTAGGGCATAATGGAGCTGGCAAAAGCACGACAATCTCGATGCTTGTTGGTCTTCTTCCTCCTACTTCAGGGGATGCTTTGGTGTTTGGAAACAATATTTTATCTGATATTGATGAGATACGGAAGGTTTTGGGTGTCTGCCCTCAAAATGATATACTCTTTCCAGAACTAACTGTGAGAGAGCATCTAGAAATATTTGCCATATTGAAGGGTGTGGAGGAAGTTTCATTAAAGGATGTTGTTACTAATATGGTGGATGAGGTGGGTTTAGCTGATAAAATCAACACTGTTGTGAGAGCTCTTTCTGGTGGCATGAAGAGAAAACTGTCTCTTGGAATTGCATTGATAGGAAACAGTAAGGTTGTAGTTCTTGATGAACCAACTAGTGGAATGGATCCATACTCAATGCGCTTGACTTGGCAGTTAATAAAAAAAATAAAAAAGGGCAGGATAATATTACTGACAACACACTCTATGGATGAAGCAGATGAACTAGGTGATCGGATAGCTATCATGGGGAATGGTTCTCTGAAATGCTGTGGAAGTTCCCTTTTCTTGAAGCATCACTATGGTGTTGGTTATACTCTAACTCTTGTGAAGTCAGCACCTTCTGCTTCAGTAGGTTCTGATATTGTACGCCGCCATATTCCATCAGCAACTTGTGTCAGTGAGGTGGGAACTGAGATTTCCTTCAGGCTTCCTCTGCTATCCTCATCAGCTTTTGAGAGTATGTTCAGGGAAATTGAAAGTTGCATGACAAAATCAGTTTCCAACTTAGAATCCACTGATAGTAATGACACACACAGTCTTGGTATTGAAAGCTATGGTATATCTGTCACAACTCTAGAGGAGGTGTTCCTGCGAGTTGCAGGATGCGACTATGATGAAGTTGAATTCTTTGAGGAGAAAAACTGTCCCCTTATATCAGACTCTGAGGCTTATCATGCTTCTTATGATCGTCCATCCACAAAAATATTTCATCTTGAAGTTTTTGGAAATTACAGAAAGATTCTTGGATTCATATCTAGCACAGTGGAAAGAGCTTGTGGTTTAATTTTTGGTACAGTGACAAGTCTCATGAACATCTTGGGCATGCTGTGTTGCAGCTGTTGTGTCATAACTAGGTCAACATTTTGGCAACATTCTAAAGCTTTATTCATTAAGAGGGCAATATCTGCTCGCAGAGATCACAAATCAATTGTTTTCCAGCTTCTGATTCCTGCTGTCTTCTTGTTTATTGGTCTTCTATTTCTCAAGCTCAAGCCACATCCTGATCAGCAGTCACTGACCTTTACAACTTCTTATTTTAATCCTTTGTTGAGCGGTGGTGGCGGGGGTGGTCCAATTCCTTTCAATCACTCTTTCCCAATTTCTGAAGAGGTAGCTTATTATGTCAAAGGAGGATGGATTCAAAGGGTCAAACCAACTGCATACAAATTCCCTAATTCAGAAAAGGCAACAGCTGATGCAGTGGAAGCAGCAGGGCTGACTCTTGGACCTGCTTTACTTTCAATGAGTGAATATTTGATGTCTAGCTTTAATGAATCCTACCAATCGAGGTATGGGGCAATTGTAATGGATGAGCAGAATAATGATGGAAGCTTAGGCTACACTGTTTTACATAATTGTTCTTGTCAGCATTCTGGTCCAACCTTTGTCAATTTGATGAATGCCGCAATTCTTAGGTTTGCTACTCGTGACATGAATATGACAATTAAGACACGTAATCACCCTCTACCAATGACACAAAGCCAGCATGTACAACACCACGATCTGGACGCCTTCTCTGCTGCAATTATTGTCAATATTGCCTTCTCTTTTATACCTGCCTCATTTGCTGTTTCAATTGTTAAGGAACGTGAAGTAAAAGCCAAACACCAACAGCTAATCAGCGGGGTTTCTATCCTTTCATATTGGGCTTCTACATTTATTTGGGACTTCGTGAGCTTCTTGTTTCCTACATCCTTTGCAGTAGTTCTCTTTTTCATCTTTGGCCTAGATCAGTTTGTCGGAGGAGCCTCATTGCTACCAACAATCCTCATGTTCTTGGAATACGGACTTGCAATTGCATCATCAACATATTGTCTTACATTCTTCTTTTCTGACCATACCATGGCTCAAAATGTGGTTCTCCTGGTCCACTTTTTCACTGGACTGATACTAATGGTTATTTCATTCATTATGGGACTGATACCATCAACAATAAGTGTGAATTCTTTCCTTAAGAATTTTTTCAGAATATCTCCTGGATTTTCTTTTGCTGATGGACTTGCTTCATTAGCTCTTCTGCGGCAAGGGATGAAAGATAAAACAAGTGATCAGGTGTTTGACTGGAATGTTTGCGGTGCATCCCTTTGTTATCTTGCTGTTGAGAGCTTTAGTTACTTTCTGTTAACACTTGCACTTGAAGTTTTTCCTTCTCTCAAATTGACTCCATTCATGATAAAAAAGTGGTTGGAAAATATGATCCCACGTAATACCCCTCCTTATCTGGAACATCTATTAGAACCTCCCTCAGAAACTGTTGGTGTGGACCTTGATGAAGATGTAGATGTGAAAACAGAAAGAAATAGAGTACTTTCGGGTTCTGTTGACAATGCCATCATCTACTTGCGTAATCTTCGTAAGTTGTATCCTGAGGGTAAGCATCATGGGCAAAAGGTTGCAGTAGATTCATTAACATTCTCAGTTCAGGAAGGAGAATGTTTCGGTTTTTTGGGGACGAATGGAGCTGGAAAGACCACAACTTTGTCCATGCTGTGTGGGGAAGAATCTCCTTCTGATGGTACTGCTTTTATTTTTGGCAAGGATATATGCTCCCATCCCAAGGCTGCTCACCAACTTATTGGATATTGTCCACAATTCGATGCTTTATTGGAATATTTAACTGTCCAGGAGCATCTTGAGCTTTATGCTAGAATAAAAGGTGTTCCAAATCACATGATAGATCATGTTGTTATGGAAAAGTTAGAGGAGTTTGACTTGTTCAAGCATGCTAATAAACCATCATTTTCACTTAGTGGAGGAAATAAAAGGAAATTGTCTGTTGCAATTGCAATGATTGGAGATCCTCCTATAGTCATTCTTGATGAGCCATCCACGGGTATGGATCCCATTGCCAAACGATTCATGTGGGATGTAATATCTAGGATCTCAACAAGACGAGGAAAGACAGCAGTAATTCTGACTACCCACAGCATGAATGAAGCTCAAGCCTTGTGCACCCGAATAGGGATAATGGTTGGTGGTCGATTGAGATGCATTGGAAGTCCACAGCATCTGAAAACAAGATTTGGGAATCATCTGGAACTAGAGATCAAACCTACTGAAGTGAGCTCTGTGGACTTAGAAATACTCTGCAAAGCTATACAAGAAAATCTTTTTGATGTCCCTTCTCATCCTAGAAGCTTACTTGATGACCTTGAAATTTGCATCGGAGGGACTGACTCCATTGTGTCAGAAAATGCCTCCATTGCAGAGATTAGCTTGTCACTAGAAATGATTGTATTGATTGGACGCTGGCTTGGCAATGAAGAAAGAATAAGGACACTTATCTCTTGCACACCTGTCTCTGATGGGGTTTTTGGTGAACAGTTATCAGAACAATTGTTGCGAGATGGTGGTATTCCATTGCTGGTTTTTTCTGAGTGGTGGTTGTCCAAAGAAAAGTTTTCCGCAATAGATTCATTTATTCTATCTTCATTTCGTGGAGCAAGATGCCAAAGCTGCAATGGTTTGAGCATCAGATACCAGTTACCATACGGTGAAGGCTTTTCTCTTGCGGATGTTTTTGGACTTCTTGAAGGAAACAGAAATAGACTGGGCATTGCAGAGTACAGCATCAGCCAGTCAACTCTGGAGACCATATTTAACCATTTTGCAGCTAATTCATGA 5676 0.4036 MGTARRQLKAMLWKNWLLKIRHPFVTCAEILLPTVVLLLLIVVRTRVDTQIHPAQPHIQKGMYVEVGRGISPSFQQILEQLLAKGEYIAFAPDTNETMRMIDLMSIKFPLLKLVSRVYKDEVELETYIRSDVYGTCNLARNCSNPRIKGAVVFHEQGPRSFDYSIRLNHTWAFSGFPDVKTIMDTNGPFLNDLELGVSAVPTMQYSFSGFLTLQQLVDSFIIFVAQQSNIKPTSESVEHPLPRYNDTDFSLKIPWTQFSPAHIRIAPFPTREYTDDQFQSIIKKFMGILYLLGFLYPISRLISYSVFEKEQKIKEGLYMMGLKDGVFHLSWFITYALQFAISSGIITACTMDNLFKFSDKTLVFAYFFIFGLSAIMLSFLISTFFKRAKTAVAVGTLSFLGAFFPYYTVYDEAISIVWKIIASLLSPTAFALGSINFADYERAHVGLRWSNIWRESSGVNFLVCLLMMLLDTLLYCAIGLYLDKVLPREYGLRYSWSFIFHKDFWRKKKIVKHCSSSWDIKITDKISESNRNFRGENTFKPAIEAISLDMKQQELDGRCIQIRNLRKVYASKKGDCCAVNSLRLTLYENQILALLGHNGAGKSTTISMLVGLLPPTSGDALVFGNNILSDIDEIRKVLGVCPQNDILFPELTVREHLEIFAILKGVEEVSLKDVVTNMVDEVGLADKINTVVRALSGGMKRKLSLGIALIGNSKVVVLDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMGNGSLKCCGSSLFLKHHYGVGYTLTLVKSAPSASVGSDIVRRHIPSATCVSEVGTEISFRLPLLSSSAFESMFREIESCMTKSVSNLESTDSNDTHSLGIESYGISVTTLEEVFLRVAGCDYDEVEFFEEKNCPLISDSEAYHASYDRPSTKIFHLEVFGNYRKILGFISSTVERACGLIFGTVTSLMNILGMLCCSCCVITRSTFWQHSKALFIKRAISARRDHKSIVFQLLIPAVFLFIGLLFLKLKPHPDQQSLTFTTSYFNPLLSGGGGGGPIPFNHSFPISEEVAYYVKGGWIQRVKPTAYKFPNSEKATADAVEAAGLTLGPALLSMSEYLMSSFNESYQSRYGAIVMDEQNNDGSLGYTVLHNCSCQHSGPTFVNLMNAAILRFATRDMNMTIKTRNHPLPMTQSQHVQHHDLDAFSAAIIVNIAFSFIPASFAVSIVKEREVKAKHQQLISGVSILSYWASTFIWDFVSFLFPTSFAVVLFFIFGLDQFVGGASLLPTILMFLEYGLAIASSTYCLTFFFSDHTMAQNVVLLVHFFTGLILMVISFIMGLIPSTISVNSFLKNFFRISPGFSFADGLASLALLRQGMKDKTSDQVFDWNVCGASLCYLAVESFSYFLLTLALEVFPSLKLTPFMIKKWLENMIPRNTPPYLEHLLEPPSETVGVDLDEDVDVKTERNRVLSGSVDNAIIYLRNLRKLYPEGKHHGQKVAVDSLTFSVQEGECFGFLGTNGAGKTTTLSMLCGEESPSDGTAFIFGKDICSHPKAAHQLIGYCPQFDALLEYLTVQEHLELYARIKGVPNHMIDHVVMEKLEEFDLFKHANKPSFSLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRFGNHLELEIKPTEVSSVDLEILCKAIQENLFDVPSHPRSLLDDLEICIGGTDSIVSENASIAEISLSLEMIVLIGRWLGNEERIRTLISCTPVSDGVFGEQLSEQLLRDGGIPLLVFSEWWLSKEKFSAIDSFILSSFRGARCQSCNGLSIRYQLPYGEGFSLADVFGLLEGNRNRLGIAEYSISQSTLETIFNHFAANS 1891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2333 1891 FunFam ATP-binding cassette sub-family A member 12 552 798 - -
Glsi02g2333 1891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 560 779 IPR027417 -
Glsi02g2333 1891 CDD ABC_subfamily_A 1463 1689 - -
Glsi02g2333 1891 CDD ABC_subfamily_A 560 781 - -
Glsi02g2333 1891 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 560 793 IPR003439 GO:0005524
Glsi02g2333 1891 FunFam ABC transporter A family member 1 1452 1706 - -
Glsi02g2333 1891 ProSitePatterns ABC transporters family signature. 1600 1614 IPR017871 GO:0005524|GO:0016887
Glsi02g2333 1891 Pfam ABC-2 family transporter protein 256 480 IPR013525 GO:0016020|GO:0140359
Glsi02g2333 1891 Pfam ABC-2 family transporter protein 993 1394 IPR013525 GO:0016020|GO:0140359
Glsi02g2333 1891 Pfam ABC transporter 580 723 IPR003439 GO:0005524
Glsi02g2333 1891 ProSitePatterns ABC transporters family signature. 695 709 IPR017871 GO:0005524|GO:0016887
Glsi02g2333 1891 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1463 1701 IPR003439 GO:0005524
Glsi02g2333 1891 Pfam ABC transporter 1485 1627 IPR003439 GO:0005524
Glsi02g2333 1891 SMART AAA_5 588 770 IPR003593 GO:0016887
Glsi02g2333 1891 SMART AAA_5 1493 1680 IPR003593 GO:0016887
Glsi02g2333 1891 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 986 1399 IPR026082 GO:0016020|GO:0055085|GO:0140359
Glsi02g2333 1891 Gene3D - 547 795 IPR027417 -
Glsi02g2333 1891 Gene3D - 1454 1704 IPR027417 -
Glsi02g2333 1891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1462 1692 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2333 Glsi-ChrGlsi02 73635799 73678261 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2333 540 826 Calmodulin-binding Proteins AT2G36910 24.746 1.15e-15 81.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2333 02 73635799 73678261 Glsi02g2333 02 73635799 73678261 ECH