Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2255 ATGGTTGCGTCTTCAATCTCTCTCAGGTCCTTCGTTAGTTCGGTCGCGATTGATCTCCATGCTAAGAGCACAACTGCTGGAAATACGTGGGAGAGCTTGGGATTCAACAAGAAAGCCAATTTGAAGTCAAACCGACTGTTTTGTGCAAAGGGGTTCAAACTGAATTGTTCAGTCGACAGAGAGATGGATGTGAGCGCGTCGGCTTTGGTGGACGATGTTGCGGAGTGCTTAAGTGAAGAGGAGATCAGGGAGCCGAGCATTTCAACTATGGTGATGAATTTTGAGAATAAGTTTGATCCTTATGGAGCAGTCAGTACGCCACTTTACCAAACAGCTACTTTTAAGCAGCCTTCTGCAACGGAAAATGGTCCTTATGACTATACCAGAAGTGGAAATCCTACTCGAGATGCTTTGGAAAGCTTACTGGCAAGGCTTGATAAAGCGGACAGAGCCCTTTGCTTCACCAGTGGAATGGCTGCTTTGAGTGCTGTTACTCATCTTGTCAGAACGGGTGAGGAAATTATTGCTGGAGATGATCTTTATGGTGGCTCGGATAGATTGCTGTCCCAAGTAATTCCAAAGACAGGAGTCATAGTGAAACGAGTAAATACAAGTGATCTAGATGAGGTTGCATCGGCTATTGGACCTTGGACTAAGCTTGTGTGGTTGGAGAGTCCTACCAATCCACGGCTACAAATTTCCGATATTCGAAAAATAGCAGAGATAGCTCACGAACATGGTGCTCTTGTATTGGTGGACAATAGTATAATGTCGCCTGTGCTGTCCCAGCCATTGGAACTTGGAGCAGATATTGTTATGCACTCAGCTACCAAATTTATTGCTGGACATAGTGATATCATGGCTGGTGTGCTTGCTGTGAAAGATGAAAGGTTGGGAAAAGAATTGTATTTCTTGCAAAACGCAGAGGGTTCAGGCTTAGCTCCATTTGACTGTTGGCTCTGTTTGCGAGGAATCAAGACAATGGCCCTGCGAGTTGAGAAGCAACAGGAGAATGCACAGAAGATTGCTGAGTTTCTTGCTTCCCATCCTCGAGTAAATAAGGTAAATTATGCTGGTTTGCCTGGTCATCCTGGACGCGACTTACACTACTCTCAGGCAAAGGGTGCAGGGTCTGTGCTTAGCTTTTTGACGGGTTCATTGGCACTCTCAAAACATATTGTTGAAACTACCAAGTACTTCAGCATAACTGTCAGTTTTGGGAGTGTAAAGTCCCTCATAAGCATGCCCTGCTTTATGTCCCACGCCAGCATACCTGCTGCAGTCCGCGAGACCAGAGGTTTAACTGAAGATCTTATACGTATATCCGTGGGGATTGAGGATGTAAATGATCTTATTGCTGATCTAGACAATGCGCTTAGATCTGGGCCTTTGTAA 1395 0.4523 MVASSISLRSFVSSVAIDLHAKSTTAGNTWESLGFNKKANLKSNRLFCAKGFKLNCSVDREMDVSASALVDDVAECLSEEEIREPSISTMVMNFENKFDPYGAVSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLARLDKADRALCFTSGMAALSAVTHLVRTGEEIIAGDDLYGGSDRLLSQVIPKTGVIVKRVNTSDLDEVASAIGPWTKLVWLESPTNPRLQISDIRKIAEIAHEHGALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDIMAGVLAVKDERLGKELYFLQNAEGSGLAPFDCWLCLRGIKTMALRVEKQQENAQKIAEFLASHPRVNKVNYAGLPGHPGRDLHYSQAKGAGSVLSFLTGSLALSKHIVETTKYFSITVSFGSVKSLISMPCFMSHASIPAAVRETRGLTEDLIRISVGIEDVNDLIADLDNALRSGPL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2255 464 ProSitePatterns Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 270 284 IPR000277 GO:0019346|GO:0030170
Glsi02g2255 464 PIRSF CGS 77 462 IPR000277 GO:0019346|GO:0030170
Glsi02g2255 464 Gene3D Aspartate Aminotransferase, domain 1 329 462 IPR015422 GO:0003824
Glsi02g2255 464 PANTHER TRANS-SULFURATION ENZYME FAMILY MEMBER 87 460 IPR000277 GO:0019346|GO:0030170
Glsi02g2255 464 NCBIfam cystathionine beta-lyase 88 461 IPR006238 GO:0004121|GO:0071266
Glsi02g2255 464 CDD CGS_like 102 460 IPR000277 GO:0019346|GO:0030170
Glsi02g2255 464 FunFam Cystathionine beta-lyase 328 461 - -
Glsi02g2255 464 SUPERFAMILY PLP-dependent transferases 94 460 IPR015424 -
Glsi02g2255 464 Gene3D - 86 328 IPR015421 GO:0003824
Glsi02g2255 464 FunFam Cystathionine gamma-synthase homolog 85 327 - -
Glsi02g2255 464 Pfam Cys/Met metabolism PLP-dependent enzyme 89 459 IPR000277 GO:0019346|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2255 Glsi-ChrGlsi02 72992918 72999162 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2255 02 72992918 72999162 Glsi02g2255 02 72992918 72999162 ECH