Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2249 ATGGAGATAGTTCCTATTCCGATGGACAACTACAATTTAGGATTTATCGGAGCAGGGAAGATGGCGGAGAGTATAGCCAGAGGAGCCGTCCGTTCTGGTGTCTTGCCCCCTTCTCGTATCTGCACTGCTCATTCCAATCCTACTCGCTGTGCCGCCTTCCAGTCCTTCGGCGTCACTGTTCTGTCCCGCAACCAAGACGTCGTTGAAGACTGTGATGTCGTCATTTTCTCTGTGAAACCTCAAGTAGTGAAAGACGTGGTTTTGCAGTTAAAGCCCCTTCTTACAAAAAAGAAACTTCTGGTTTCAGTTGCTGCTGGAGTGAAATTGAAAGATCTTCAGGAATGGGCCGGTCATAGTCGATTCATAAGGGTAATGCCTAATACTCCTGCTGCTGTAGGCGAGGCTGCATCAGTTATGAGCTTGGGAGGAGATGCAACAGAAGAAGATGGAAACCTTATTAACAAATTATTTGGATCAGTTGGCAAAATATGGAAAGCTGATGAGAAGTTTTTTGATGCAATAACTGGTCTGAGTGGCAGTGGTCCAGCTTATATTTATTTAGCAATAGAGGCTTTAGCAGATGGTGGAGTAGCTGCAGGTCTACCGAGAGACCTTTCACTGAGTTTAGCTTCTCAGACTGTATTAGGAGCAGCATCAATGGCCACTAATGCAGGGAAGCATCCAGGTCAGCTCAAAGACGATGTTACTTCTCCTGGTGGGACAACAATTTCTGGGATTCATGAGTTGGAGAAAGGTGGGTTTCGTGGAATACTGATGAATGCTGTTGTTGCTGCTGCCAAACGTAGCCGAGAGCTTTCCTAA 822 0.4611 MEIVPIPMDNYNLGFIGAGKMAESIARGAVRSGVLPPSRICTAHSNPTRCAAFQSFGVTVLSRNQDVVEDCDVVIFSVKPQVVKDVVLQLKPLLTKKKLLVSVAAGVKLKDLQEWAGHSRFIRVMPNTPAAVGEAASVMSLGGDATEEDGNLINKLFGSVGKIWKADEKFFDAITGLSGSGPAYIYLAIEALADGGVAAGLPRDLSLSLASQTVLGAASMATNAGKHPGQLKDDVTSPGGTTISGIHELEKGGFRGILMNAVVAAAKRSRELS 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2249 273 FunFam Pyrroline-5-carboxylate reductase 6 170 - -
Glsi02g2249 273 FunFam Pyrroline-5-carboxylate reductase 171 273 - -
Glsi02g2249 273 Hamap Pyrroline-5-carboxylate reductase [proC]. 11 272 IPR000304 GO:0004735|GO:0006561
Glsi02g2249 273 NCBIfam pyrroline-5-carboxylate reductase 13 272 IPR000304 GO:0004735|GO:0006561
Glsi02g2249 273 ProSitePatterns Delta 1-pyrroline-5-carboxylate reductase signature. 228 250 IPR000304 GO:0004735|GO:0006561
Glsi02g2249 273 Gene3D - 1 170 - -
Glsi02g2249 273 PANTHER PYRROLINE-5-CARBOXYLATE REDUCTASE 10 273 - -
Glsi02g2249 273 PIRSF P5CR 10 273 IPR000304 GO:0004735|GO:0006561
Glsi02g2249 273 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 164 IPR036291 -
Glsi02g2249 273 Pfam NADP oxidoreductase coenzyme F420-dependent 13 106 IPR028939 -
Glsi02g2249 273 Gene3D - 171 273 - -
Glsi02g2249 273 Pfam Pyrroline-5-carboxylate reductase dimerisation 168 272 IPR029036 -
Glsi02g2249 273 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 167 273 IPR008927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2249 Glsi-ChrGlsi02 72952133 72956518 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2249 02 72952133 72956518 Glsi02g2249 02 72952133 72956518 ECH