Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2234 ATGTTGGAATGCTCCTCCAAGATTTTCTACATAGCCTTTCTACCTTCTAAGGGCAGTTTTCCACTATAAGGGAGCAAAGGAAAAAGGTGCGAGAAAAACAACAAAGAGTCGGAAATTGAGACCCAGGCAAATTACACCGCAAAGGTCATTGCTTTCTGCTGCACTGAGAAGATGAACGGTGGCCCTTCTGCTAATGCTCCCGTCACTAGGACTTTCATTATCGCCTCAGCACTTTTCACAATCTTCTTTGGGATCCAAGGCCGTTTCAACAGTCTGGGATTGTCTTATCAGGATATTTTTGGAAAGCTTCGCCTCTGGAAGTTGATTATGTCCATATTTGCCTTTTCATCAACACCAGAGTTGTTGTTTGGACTTTATCTACTATACTATTTCAGGGTCTTTGAGAGACAGATAGGTTCCAATAAATACTCAGTGTTTATCATGTTCTCCATATTAATTTCACTACTGTTTGAGGTGCTTTCTGTAGCAGTTTTAAAAGATCCCACAGCAAACTTAGTCACACCTGGGCCGTATGGTCTTATATTTGCTTCATTTGTACCCTTTTTCTTTGACATTCCAGTTTCAACGCGGTTTCGTGTATGTGGTTTCCACTTCTCTGATAAGTCATTCATATATCTAGCTGGCCTGCAGCTTCTTTTATCATCATGGAAAAGGTCTATCTTACCAGGGATGTGTGGCATCCTTGCTGGTTCCTTGTACCGTTTAAATGTCTTATTTATCCGTAAAGCCAAGTTCCCAGAGTTTATGGCCTCATTCTTTTCACGGATTTCTTTGCCATCTGCGGGGAGTCCGCGTTCAGCATCAACAAGGAATGTAGTGGGAAATATACCATCCCATCCAGCTCGCCAAATGGAGAGGAACTACCCTGCTCCAGTGCAATCTGCCCCAGAACCACCGGAGGATTTTATCTCAACACTCGTCTCTATGGGCTTTGATAGAAACTCTGCCAGACAAGCACTAGTGCAGGCCAGAAACGATGTTAATGTGGCCACAAACATCCTCCTGGAAGCACAGTCCCACTAA 1044 0.4349 MLECSSKIFYIAFLPSKGSFPLXGSKGKRCEKNNKESEIETQANYTAKVIAFCCTEKMNGGPSANAPVTRTFIIASALFTIFFGIQGRFNSLGLSYQDIFGKLRLWKLIMSIFAFSSTPELLFGLYLLYYFRVFERQIGSNKYSVFIMFSILISLLFEVLSVAVLKDPTANLVTPGPYGLIFASFVPFFFDIPVSTRFRVCGFHFSDKSFIYLAGLQLLLSSWKRSILPGMCGILAGSLYRLNVLFIRKAKFPEFMASFFSRISLPSAGSPRSASTRNVVGNIPSHPARQMERNYPAPVQSAPEPPEDFISTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2234 347 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 304 344 IPR015940 -
Glsi02g2234 347 SUPERFAMILY Rhomboid-like 65 242 IPR035952 -
Glsi02g2234 347 Gene3D - 64 243 IPR035952 -
Glsi02g2234 347 Pfam UBA/TS-N domain 310 341 IPR015940 -
Glsi02g2234 347 Gene3D - 270 346 - -
Glsi02g2234 347 Pfam Rhomboid family 104 241 IPR022764 GO:0004252|GO:0016020
Glsi02g2234 347 SMART uba_6 306 343 IPR015940 -
Glsi02g2234 347 PANTHER RHOMBOID-RELATED PROTEIN 47 292 - -
Glsi02g2234 347 SUPERFAMILY UBA-like 299 344 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2234 Glsi-ChrGlsi02 72843339 72851490 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2234 02 72843339 72851490 Glsi02g2234 02 72843339 72851490 ECH