Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2225 ATGCTTGCAAAAACGCATATGCGTAAGTTTTTTCAATGGGGGCTTGTCTTAAATCGCCTTCAACTTCTGACGGTGAAAAGCTTGGAGGATCCTCCTCTCATGATGGGGGTCTCAAGCGCTGGAGTTGATCAAATCCGGAATCATTCCTTTTGTGCTGGCATGAATGGAGCTAATGGATTAGAAGCTGCCAGCTTTTGGAAAAGTGGCAAGATAAATCGTCATTTTACGTCTGATCGCAATGATAGATGTACTATGAAGGAATTCTCAAGTAAGCTTCTTAAAAGTATTCCAGACTATGTGAAGATTGTGGAGGTTGGTCCAAGGGATGGATTGCAAAATGAGAAGAATATTGTTCCTACTGCTGTGAAAGTTGAGTTGATAAAACTGCTAGTTTCTTCTGGATTGCCTGTTGTTGAGGCAACAAGTTTTGTTTCACCAAAATGGGTACCGCAGCTGGCAGATGCAAAGGATGTAATGTCAGCAATTCAGAATGTTGAAGGTGTTAGCTTTCCTGTCTTAACTCCAAATCTTAAAGGTTTTGAGGCAGCTGTTGCTGCTGGAGCTAAGGAAGTGGCTGTTTTTCCTGCAGCTTCAGAATTATTCTCTAAAGCAAATCTCAACTGTAGCATTGAGGATAATCTTGTTCGTTGTCGTGATATTGCTTTAGCTGCTAGAAACCTCTCAATCCCAGTTCGCGGATATGTATCGTGTGTTGTGGGATGTCCTCTGGAAGGATTTATTGCTCCAGCTAAAGTAGCATACGTGGCAAAAGCACTTTATGAGATGGGTTGCTCAGAGATTTCCCTAGGCGATACAATTGGTGTTGGTACACCTGGCACTGTCATACCAATGCTTGAAGCAGTTCTTGATGTTGTTCCTGTTGACAAGCTTGCTGTTCATTTTCATGATACTTATGGTCAGGCTCTTTCAAATACTCTTGTATCGCTTCAGATGGGGATCAGCGCTGTGGATTCGTCTGTGTCTGGTCTTGGGGGTTGCCCATATGCGAAGGGTGCAACTGGGAATGTTGCAACTGAGGATGTCGTTTACATGCTGAATGGGATTGGAGTGAAAACCAATGTGGACCTTGCAAAGCTTATGGTGGCCGGGGATTTTATCTGCAAGCATTTAGGACGTGCATCTTCTTCAAAAGCTGCTACTGCCTTGAGTAAAAGTACTGCTCATGCCTCCAAACTGTGA 1200 0.435 MLAKTHMRKFFQWGLVLNRLQLLTVKSLEDPPLMMGVSSAGVDQIRNHSFCAGMNGANGLEAASFWKSGKINRHFTSDRNDRCTMKEFSSKLLKSIPDYVKIVEVGPRDGLQNEKNIVPTAVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMSAIQNVEGVSFPVLTPNLKGFEAAVAAGAKEVAVFPAASELFSKANLNCSIEDNLVRCRDIALAARNLSIPVRGYVSCVVGCPLEGFIAPAKVAYVAKALYEMGCSEISLGDTIGVGTPGTVIPMLEAVLDVVPVDKLAVHFHDTYGQALSNTLVSLQMGISAVDSSVSGLGGCPYAKGATGNVATEDVVYMLNGIGVKTNVDLAKLMVAGDFICKHLGRASSSKAATALSKSTAHASKL 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2225 399 ProSiteProfiles Pyruvate carboxyltransferase domain. 100 367 IPR000891 GO:0003824
Glsi02g2225 399 Gene3D Aldolase class I 93 392 IPR013785 -
Glsi02g2225 399 Pfam HMGL-like 100 372 IPR000891 GO:0003824
Glsi02g2225 399 SUPERFAMILY Aldolase 95 392 - -
Glsi02g2225 399 CDD DRE_TIM_HMGL 102 375 - -
Glsi02g2225 399 FunFam Hydroxymethylglutaryl-CoA lyase, mitochondrial 94 392 - -
Glsi02g2225 399 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 85 393 IPR043594 GO:0016833
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2225 Glsi-ChrGlsi02 72791984 72796671 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2225 02 72791984 72796671 Glsi02g2225 02 72791984 72796671 ECH