Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2206 ATGGATTCCTCATCTGCTTCCATTGATGGCTTTTCTGGATTTAAGGATAAGGAGTCAATGGTTGACCCCTTTTTGGTTGAGGCTCTCCAGAACTCTCGTCACCGTCTCACCATTTTGCGTATGGAACTTGATATCGAGAGGTTTCTGAATAATGTTGATCAGCAGCATTTTGAGTTCCAACATTTCCCTTCTTCCTATCTCCGACTGGCAGCACATCGTGTTGCTCAACACTATGGTATGCAAACGATGATCCAAGATAATGGCCTAGACAGCCAGGGAAGTAAAATAGTGGTGAAAAAGTTAGCAGAAAGCAGATATCCTGTGGTCCGCTTGTCTGAAATACCTGTTAAACAGCAGGAAAATGATAAGCCTGAGCAAATAAAAATTGCCATAAGGCCTAGGCCTAATAAAAACAATGTAAATGAAGCCAATGAAGCAGGACAAAAAGGAAATTCTATGAGAAGTGTGGAAGAGAGGAAGGAGGAATATGATCGGGCACGAGCACGCATCTTTAGTAGCTCTAGAAGTTCTGATTCAGGTGACACATCGTCCCCGGTCCCAGTGGATGGAAGAAATTGTTATATGAGCAAGGATGAAAATGAAGCTGGCAAGAACCCTATTGCTGATCCTGAAAAATGCAGTAGTGTCAGGGACATTGGATCTACTCGTGTTGCCATTTTCAGAGATAAGGAAAAGGATCGTAGTGATCCAGATTATGATCGTAGTTATGGAAGGTATGCTAGGAATATTCCAAATTCTAGCCTTAACTTGGTGCCTTTTAATCTGCATGAAGTTCAGCCTTCGTTTGCTCAATATGACACTACTTTCAATCAGCTGGGTCAGATGTCACATACTCAAGCTACACTTGGCTATGGACCCCCGTCAAGCCAGACAATGAGTCCTTTTTGTGCTGCAGGATTGAATCACACGTCAGGGGATGTTGCTTACCTACAGTGGCCAAGTGCTGCTATGATGTATGCGCATTCATATGACCAATTTAGACATGCTGTTTTTCAGGCTCCGTATGGTCAACAGCCACTGAGCTTTGACTATCCGCAGAACTACTAG 1068 0.4335 MDSSSASIDGFSGFKDKESMVDPFLVEALQNSRHRLTILRMELDIERFLNNVDQQHFEFQHFPSSYLRLAAHRVAQHYGMQTMIQDNGLDSQGSKIVVKKLAESRYPVVRLSEIPVKQQENDKPEQIKIAIRPRPNKNNVNEANEAGQKGNSMRSVEERKEEYDRARARIFSSSRSSDSGDTSSPVPVDGRNCYMSKDENEAGKNPIADPEKCSSVRDIGSTRVAIFRDKEKDRSDPDYDRSYGRYARNIPNSSLNLVPFNLHEVQPSFAQYDTTFNQLGQMSHTQATLGYGPPSSQTMSPFCAAGLNHTSGDVAYLQWPSAAMMYAHSYDQFRHAVFQAPYGQQPLSFDYPQNY 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2206 355 Pfam R3H domain 37 89 IPR001374 GO:0003676
Glsi02g2206 355 SMART R3H_4 19 101 IPR001374 GO:0003676
Glsi02g2206 355 SUPERFAMILY R3H domain 11 136 IPR036867 GO:0003676
Glsi02g2206 355 MobiDBLite consensus disorder prediction 137 151 - -
Glsi02g2206 355 CDD R3H_encore_like 34 100 - -
Glsi02g2206 355 MobiDBLite consensus disorder prediction 119 215 - -
Glsi02g2206 355 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 18 345 - -
Glsi02g2206 355 MobiDBLite consensus disorder prediction 152 171 - -
Glsi02g2206 355 MobiDBLite consensus disorder prediction 172 186 - -
Glsi02g2206 355 ProSiteProfiles R3H domain profile. 35 102 IPR001374 GO:0003676
Glsi02g2206 355 ProSiteProfiles SUZ domain profile. 105 175 IPR024771 -
Glsi02g2206 355 Pfam SUZ domain 126 174 IPR024771 -
Glsi02g2206 355 Gene3D - 13 133 IPR036867 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2206 Glsi-ChrGlsi02 72652848 72656010 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2206 02 72652848 72656010 Glsi02g2206 02 72652848 72656010 ECH