Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2152 ATGTCTTATATGAGTTTCAATTTGATAAAATTACATGAGTCTGAAGTTGGGTTGACTGGGTATGGATGCTGCTGCCCAGTCCACATTGTTAGTGGGATCAGGGGTGATGGGTTGGATGGTGCTGTTTTGAACTTGGAGATATTGGATGTTGAAAAGGGATTTCTAGCTGCTTCGGATGCATGCCATTTTTTAGTTTGCATTGACAGAATTGCACAACCACTGAATTCTTTGTTATACAAAAGGATCCTAGTGTTATCCACTTGCATAGGATTAGCATGTGCATGCAACTTATATGGAAGGGTGGTAGAAAATCAATGGAACCAACATAAAAGCGTTGCTTGTGCAGGTTGTTGTTTCATTAAGTATGCCACCTCAGAAGAAGCTGACCAGGCAATTAGAGCGTTGCACAATCAACATACTCTTCCTGGAGGTATAGGTCCAATCCAAGTGAGATATGCTGATGGTGAACGGGAACGCCTTGGTGCAGTTGAGTACAAATTATTTGTGGGCTCTCTGAACAAACAGGCTACAGTAGATGAAGTTGAGGAAGGTTGTGATCAACCATTAACTGTCCGGTTTGCTGATCCCAAGAGACCTCGGCAAGGTGATTCAAGGGGTCCTGCGCTTGGGGGTCCAGGATTTGGTCCTAGATTTGAAGCACCCAGCCCACGTCCTCCATCCAATTTTACTGATCCTATGGGTGATCGTATCCCTCCCCCCAATGCTTGGCATCCAATGCGTCCACCAAATTTGGGGCCATCCTCTAATTCTGGTCTTCATGGAATGGGGCCTCCATTGCTTCCAAGATCTGGTGACTCAGCAATGCCTATGAATACAGGTGGCCCTGTGAGTGGAATTGGAGGCCCCATAGATGGTCCTTTTCAAGGACAGGCTTTGTCAGCAATGTCACAGCGGAATTTCAACCAGCCGATCCCACAAATTGCACCAGCTGGCCAACAAATATCATCATTGCAGAAACCTATGCAATCACCTCAGGATGTGCCACCTTCCCTCCAATTGTACCCTCAGGCTCTGATGCCCTACTTACAAACACCAAAGTCCCTTTCATCAGTTAGGCAGGTTGGCCAGCCACAGCTTCCTCCATCTGGGGGTCCTGTGCCTTCACAGCAGGTACCTGGCATAAATGGACAGTTACCTGCTCAGCATCAAACTCAATGGAATGCTTCATCTTCTGCAATGCCTCAGAGCCCTCTTGATACCAGCTTGCAATCTAATACACCATCAATTACTGCAAATCAACAGCGAATTCCAGCCCCAGTGCAGCAGCACTCACTTCAGCCTCTTCAGCAGTCCCCATCCCCGCTGGCTCAGATGTTGTCACAACAAACTCAGACTTTGCAAGCAAGCTTTCATTCATCTCAGCAGGCCTTTTCCCAGCTTCAACAACAAGTACAGATGATGCAACCATCTAGTCAAGATTTAGCATTGCAGCAAACTGCAGAAGCAGCTAAAAAGCAGTCTCAATGGGCTGGGACTGTATCACAGGCAGTGGCCAGCACTGCTGTTGCTGCACCAGCCATAGATGTGCCTTTATCCACATCTGTTGCTTCTGCTATACCTGCAATAAATCGGAAAACAGATCTTGTAAAATGCAATTGGACAGAGCATACATCTCCTGAGGGCTTCAAGTATTATTACAATAGTGTCACTTGTGAAAGTCGGTGGGAGAAACCTGAGGAGTTGACACTATCTGAAAGGCAAAAGCAACAGCATATGCCATCGGTCCAGCAGTCAACTCAGTCACAACCACCAGTGTTATCTGCCCAACAAGTTCCACAGATGCAACAGGTGCTGCCTCAAGGTCATCTCCAAGTACAGGTTCTACACCAGCAACAGATACAGCAGCCTTCTTTGTCTTCTTCAGCATATGAAGTTATAGGTCATCAAAATGTTCAGGAAGCTGGTTATACAGAGTTACAGACACCAGGTATTTCTGTTGGTGATCCTACACGCTTCCCTCAGGGGATTTATGCATCACAAGAGTGGATGAACTTGAACTTGGAAGGGTTGAGCTTTAAGGTGGTGGCAAATATGGACGTTGCTGCTTCTAAATGGCTGAGGAACAAGATCTCTAATCTGATGCTCAAAGGTAGGACTAGTGACCTTGGTTTTGACCCTCGAGTAACATGGTGTAACAGTTAA 2163 0.4632 MSYMSFNLIKLHESEVGLTGYGCCCPVHIVSGIRGDGLDGAVLNLEILDVEKGFLAASDACHFLVCIDRIAQPLNSLLYKRILVLSTCIGLACACNLYGRVVENQWNQHKSVACAGCCFIKYATSEEADQAIRALHNQHTLPGGIGPIQVRYADGERERLGAVEYKLFVGSLNKQATVDEVEEGCDQPLTVRFADPKRPRQGDSRGPALGGPGFGPRFEAPSPRPPSNFTDPMGDRIPPPNAWHPMRPPNLGPSSNSGLHGMGPPLLPRSGDSAMPMNTGGPVSGIGGPIDGPFQGQALSAMSQRNFNQPIPQIAPAGQQISSLQKPMQSPQDVPPSLQLYPQALMPYLQTPKSLSSVRQVGQPQLPPSGGPVPSQQVPGINGQLPAQHQTQWNASSSAMPQSPLDTSLQSNTPSITANQQRIPAPVQQHSLQPLQQSPSPLAQMLSQQTQTLQASFHSSQQAFSQLQQQVQMMQPSSQDLALQQTAEAAKKQSQWAGTVSQAVASTAVAAPAIDVPLSTSVASAIPAINRKTDLVKCNWTEHTSPEGFKYYYNSVTCESRWEKPEELTLSERQKQQHMPSVQQSTQSQPPVLSAQQVPQMQQVLPQGHLQVQVLHQQQIQQPSLSSSAYEVIGHQNVQEAGYTELQTPGISVGDPTRFPQGIYASQEWMNLNLEGLSFKVVANMDVAASKWLRNKISNLMLKGRTSDLGFDPRVTWCNS 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2152 720 Gene3D - 536 581 - -
Glsi02g2152 720 ProSitePatterns WW/rsp5/WWP domain signature. 540 565 IPR001202 GO:0005515
Glsi02g2152 720 PANTHER RNA BINDING PROTEIN 98 205 - -
Glsi02g2152 720 MobiDBLite consensus disorder prediction 355 413 - -
Glsi02g2152 720 MobiDBLite consensus disorder prediction 375 413 - -
Glsi02g2152 720 ProSiteProfiles WW/rsp5/WWP domain profile. 540 567 IPR001202 GO:0005515
Glsi02g2152 720 SUPERFAMILY WW domain 539 569 IPR036020 GO:0005515
Glsi02g2152 720 SUPERFAMILY RNA-binding domain, RBD 96 160 IPR035979 GO:0003676
Glsi02g2152 720 MobiDBLite consensus disorder prediction 567 598 - -
Glsi02g2152 720 CDD WW 537 567 IPR001202 GO:0005515
Glsi02g2152 720 Gene3D - 91 162 IPR012677 -
Glsi02g2152 720 MobiDBLite consensus disorder prediction 190 264 - -
Glsi02g2152 720 SMART ww_5 535 567 IPR001202 GO:0005515
Glsi02g2152 720 MobiDBLite consensus disorder prediction 574 598 - -
Glsi02g2152 720 Pfam WW domain 538 565 IPR001202 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2152 Glsi-ChrGlsi02 71924430 71937249 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2152 02 71924430 71937249 Glsi02g2152 02 71924430 71937249 ECH