Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2149 ATGCCATTGATGGTGGGGCACATTTATCTTATTGGAGCACTTTGGACCAGGAAAACAAATCCAACATTCTTCTTCTTTTGGGAGATAAAGACAGGCAAAAGCTTCCAGAGTGTGTGTAGAGAGGAGCGCGAGGAGCAGAGGAAGAAATCCCGATTGAAGCATCCTCAGACAACAATGGCGAAACACGAAGAGCTTCCGATCCCGATTTTCAATTCACTTGAGTCTGTGTATGGCGGAGGATCTCAGCTCGAAGAAGCTAAGCTTCGTTTTGACAATTTGAAGTCCAAGTTCGAAAAAACCTTCGGTCACCCTCCTCAAGTCTTCGCTCGCTCACCTGGGAGAGTGAACTTAATCGGAGAGCACATTGATTACTCGGGATATTCAGTGTTGCCGATGGCAATTCGGCAAGATACGATTGTGGCAATACGGAAAAACGAAGCCGAGAGTACTCTTAGAATTGCTAATGTGAATGATCACAAACATTCCATGTGCACTTATCCTGCTGATCCTAACCAGGCACTTGACTTGAAGAATCACAAATGGGGTCATTATTTTATTTGTGGGTACAAAGGTTTTTACGAATATGCAAAATTGAAAGGTGTGGATGTCGGTCAAAAAGTTGGACTTGATGTTCTTGTTGATGGAACAGTTCCTCAAGGTTCGGGACTATCAAGCTCTGCGGCATTTGTTTGCTCTTCCACAATTGCTATTATGGCTGCTTTTGGAGTAAATTTCCCGAAGAAAGAAATTGCACAAGTTACATGTGAATGTGAAAGACACGTTGGAACACAATCTGGCGGGATGGATCAGGCAATCTCTGTCATGGCCAAAACTGGGTTTGCAGAGCTGATTGATTTCAACCCCATTCGTGCGACAGATGTACAGCTTCCTTCTGGTGGGACTTTTGTAATAGCCCACTCTTTAGCAGAGTCCCAAAAAGCTGTCACAGCTGCTACTAATTATAACAATAGGGTTGTGGAATGCCGTTTGGCTGCAATTGTGCTAGGTATAAAGCTGGGAATGAAGCCAAAAGAGGCAATATCAAAAGTGAAAACACTGTCTGATGTTGAAGGGCAATGCGTATCATTTGCCAGTCAAAAAGGTTCATCTGATCCTGTCCTTGCTGTGAAGGAATTTTTGAAGGAAGGACCATATACAGCTGAAGAGGTTGAAAAAATTACTGAGGAAAAGCTTACCTCAATTTTGAGCAGTAATGCAGCTTATTTAGATGTTCTAAAAGTTGCTAACCACTACAAGTTACATCAGAGAGCTGCCCATGTGTACTCAGAAGCCAAGAGGGTACATGCTTTCAAGGATATTGTATCATCAAAATTAAGTGAGGAGGAAACACTTAAAAAGCTAGGTGACCTTATGAATGAGAGTCATTATAGCTGCAGCGTTTTATATGAATGCAGCTGTCCGGAGTTGGAAGAACTTGTAAATATTTGTCGTAAACATGGCGCCATTGGGGCAAGGCTTACTGGAGCTGGATGGGGTGGTTGTGCTGTTGCTTTGGTGAAAGAGAGCATTGTCCCACAATTTATCCTTAATTTGAAGGAAGGCTACTACCAGTCTAGGATTGACAGGGGCATAATCGGCAAGAACGATCTTGGTCTTTACGTATTTGCTTCCAAGCCATCAAGTGGTGCTGCCATTTTCAAGTTTTAG 1668 0.4299 MPLMVGHIYLIGALWTRKTNPTFFFFWEIKTGKSFQSVCREEREEQRKKSRLKHPQTTMAKHEELPIPIFNSLESVYGGGSQLEEAKLRFDNLKSKFEKTFGHPPQVFARSPGRVNLIGEHIDYSGYSVLPMAIRQDTIVAIRKNEAESTLRIANVNDHKHSMCTYPADPNQALDLKNHKWGHYFICGYKGFYEYAKLKGVDVGQKVGLDVLVDGTVPQGSGLSSSAAFVCSSTIAIMAAFGVNFPKKEIAQVTCECERHVGTQSGGMDQAISVMAKTGFAELIDFNPIRATDVQLPSGGTFVIAHSLAESQKAVTAATNYNNRVVECRLAAIVLGIKLGMKPKEAISKVKTLSDVEGQCVSFASQKGSSDPVLAVKEFLKEGPYTAEEVEKITEEKLTSILSSNAAYLDVLKVANHYKLHQRAAHVYSEAKRVHAFKDIVSSKLSEEETLKKLGDLMNESHYSCSVLYECSCPELEELVNICRKHGAIGARLTGAGWGGCAVALVKESIVPQFILNLKEGYYQSRIDRGIIGKNDLGLYVFASKPSSGAAIFKF 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2149 555 FunFam galactokinase-like isoform X1 95 294 - -
Glsi02g2149 555 NCBIfam galactokinase 92 523 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Glsi02g2149 555 SUPERFAMILY GHMP Kinase, C-terminal domain 301 528 IPR036554 -
Glsi02g2149 555 Gene3D - 95 294 IPR014721 -
Glsi02g2149 555 PRINTS Mevalonate kinase family signature 215 237 - -
Glsi02g2149 555 PRINTS Mevalonate kinase family signature 111 135 - -
Glsi02g2149 555 PRINTS Mevalonate kinase family signature 490 507 - -
Glsi02g2149 555 PRINTS Mevalonate kinase family signature 257 276 - -
Glsi02g2149 555 FunFam Galactokinase 320 470 - -
Glsi02g2149 555 SUPERFAMILY Ribosomal protein S5 domain 2-like 85 297 IPR020568 -
Glsi02g2149 555 PANTHER MEVALONATE KINASE/GALACTOKINASE 64 551 - -
Glsi02g2149 555 ProSitePatterns GHMP kinases putative ATP-binding domain. 217 228 IPR006203 GO:0005524
Glsi02g2149 555 PRINTS Galactokinase signature 422 436 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Glsi02g2149 555 PRINTS Galactokinase signature 113 131 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Glsi02g2149 555 PRINTS Galactokinase signature 208 226 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Glsi02g2149 555 Pfam Galactokinase galactose-binding signature 96 144 IPR019539 -
Glsi02g2149 555 Gene3D - 320 470 - -
Glsi02g2149 555 Pfam GHMP kinases C terminal 447 523 IPR013750 -
Glsi02g2149 555 Pfam GHMP kinases N terminal domain 210 275 IPR006204 GO:0005524
Glsi02g2149 555 ProSitePatterns Galactokinase signature. 113 124 IPR019741 -
Glsi02g2149 555 Gene3D - 295 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2149 Glsi-ChrGlsi02 71899401 71906198 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2149 02 71899401 71906198 Glsi02g2149 02 71899401 71906198 ECH