Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2132 ATGACGTTTGTGGCTCTGTTCGTTTCGGCAACGAAGCTCGCCGGAGCAATCGTCACAATCACCGTCGCTGCTAATGCCTTCTCCTACTCCCGTTTCCGAAGAAAGAATCTGCGCAAATTCCGCTCGCCTATCGACGAGTCCTCCGACGTACTCGCGGACTTCAGTGTTAATGAAGGGGAAAGTGGGTTTTTCTTTGGCCTGGCAACAGCACCAGCACATGTTGAGGATAGGCTTAATGATGCTTGGATCCAGTTTGCAAAAGAAGACAAGCCTGGTGATGACTCACAAGAGGTCAAACAACCAGCTGATGCTTTGATGGGTTCTGCTGCCGGTGATGGTGGGTCTCACCAAGCTTCACCATCTGGAGAACATGATGATAAAGGAGTTAAAAAGAAAAAAAAACCTCTTAAGGTTGCTATGGAGGCCATGATTAGAGGATTGGAAAAGTACATAGAAGAAGAAGAAGACGACGAGGCAGCAACAGCTGTGCCAAAAGAACAACAACATCATAATGTAACTGCTTGGCATAATGTTCCGCACCCGGAGGAGAGGTTAAGGTTTTGGTCTGACCCTGATAAAGAATTAAAATTGGCCAAAGATACGGGTGTTACAGTCTTTCGCATGGGTATAGATTGGTCAAGAATCATGCCAGAGGAACCAGTAAATGGGCTTAAAGAATCTGTTAATTATGCTGCTTTGGAGCGTTATAAGTGGATTATCAATAGGGTTCGGTCATATGGAATGAAGGTTGTGCTCACTCTTTTTCATCACTCACTGCCACCCTGGGCTGGTGAGTATGGAGGTTGGAAGCTGGAAAAGACTGTTGATTATTTCATGGACTTTACCAGGCTTGTTGTAAACAGTGTATCTGATTTAGTAGAATACTGGATTACATTTAATGAGCCTCATGTCTTCTGTATGCTTACTTATTGTGCTGGAGCTTGGCCCGGTGGTCATCCTGATATGCTGGAGGTGGCTACTTCTGCTCTTCCTACTGGCGTTTTCCAGCAGGCCATGCATTGGATTGCTATTGCACACTCAAAAGCATATGATTACATCCAAGAACAAAGTAACTCGTTGAAACCCTTAGTTGGTGTAGCACACCATGTGTCATTCATGCGACCCTATGGTCTGTTTGATGTTGCTGCAGTTTCACTGGCTAATTCCTTAACTCTCTTCCCGTACATCGATAGTATTTCTGACCATCTGGATTTTATAGGCATAAACTACTATGGGCAGGAAGTGGTTTCTGGTGCTGGACTGAAACTTGTGGAAACAGATGAGTACAGTGAATCTGGTCGAGGGGTATATCCTGATGGCTTATACCGAATGTTGCTTCAGTTCCACGAAAGATACAAACATCTAAATGTTCCCTTCATCATTACTGAAAATGGGGTATCTGATGAGACAGATCTAATCCGCCGGCCATATCTGTTGGAACATTTGCTTGCTGTATATGCAGCCATGATCATGGGTGTGCCTGTGCTTGGTTACCTCTTTTGGACTATTTCTGATAACTGGGAGTGGGCTGATGGATATGGTCCCAAATTTGGACTTGTAGCAGTTGACAGGGCAAATAATTTTGCACGGATCCCACGCCCTTCTTACCACCTATTTTCTAAAATTGTGAAGACAGGTAAAGTTACCCGTGAAGATCGTGAAGGAGCATGGAATGAACTCCATAGAGCTGCCAAGGAGAAGAAAACAAGACCATTTTATCGGGCAATGGACAAGCACGGTTTGATGTATGCAGGTGGACTTGATGAACCTATACAGCGACCTTATATTGAGCGAGACTGGCGGTTTGGTCACTATGAGATGGATGGTCTACAGGATCCTTTGAGCTGCTTCTCAAGATTCATTATCCGACCATTCTCCCTAAAAAGGAAAAAGAAACCTCGAAAGAAGTATGCCAAATTAGTTCTTCAGCCTATTGAAGCCGCATGA 1947 0.4453 MTFVALFVSATKLAGAIVTITVAANAFSYSRFRRKNLRKFRSPIDESSDVLADFSVNEGESGFFFGLATAPAHVEDRLNDAWIQFAKEDKPGDDSQEVKQPADALMGSAAGDGGSHQASPSGEHDDKGVKKKKKPLKVAMEAMIRGLEKYIEEEEDDEAATAVPKEQQHHNVTAWHNVPHPEERLRFWSDPDKELKLAKDTGVTVFRMGIDWSRIMPEEPVNGLKESVNYAALERYKWIINRVRSYGMKVVLTLFHHSLPPWAGEYGGWKLEKTVDYFMDFTRLVVNSVSDLVEYWITFNEPHVFCMLTYCAGAWPGGHPDMLEVATSALPTGVFQQAMHWIAIAHSKAYDYIQEQSNSLKPLVGVAHHVSFMRPYGLFDVAAVSLANSLTLFPYIDSISDHLDFIGINYYGQEVVSGAGLKLVETDEYSESGRGVYPDGLYRMLLQFHERYKHLNVPFIITENGVSDETDLIRRPYLLEHLLAVYAAMIMGVPVLGYLFWTISDNWEWADGYGPKFGLVAVDRANNFARIPRPSYHLFSKIVKTGKVTREDREGAWNELHRAAKEKKTRPFYRAMDKHGLMYAGGLDEPIQRPYIERDWRFGHYEMDGLQDPLSCFSRFIIRPFSLKRKKKPRKKYAKLVLQPIEAA 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2132 648 Gene3D Glycosidases 144 557 - -
Glsi02g2132 648 Coils Coil 137 157 - -
Glsi02g2132 648 PRINTS Glycosyl hydrolase family 1 signature 516 528 IPR001360 GO:0004553|GO:0005975
Glsi02g2132 648 PRINTS Glycosyl hydrolase family 1 signature 402 416 IPR001360 GO:0004553|GO:0005975
Glsi02g2132 648 PRINTS Glycosyl hydrolase family 1 signature 492 509 IPR001360 GO:0004553|GO:0005975
Glsi02g2132 648 PRINTS Glycosyl hydrolase family 1 signature 459 467 IPR001360 GO:0004553|GO:0005975
Glsi02g2132 648 PRINTS Glycosyl hydrolase family 1 signature 471 482 IPR001360 GO:0004553|GO:0005975
Glsi02g2132 648 SUPERFAMILY (Trans)glycosidases 171 551 IPR017853 -
Glsi02g2132 648 PANTHER GLYCOSYL HYDROLASE 165 392 IPR001360 GO:0004553|GO:0005975
Glsi02g2132 648 MobiDBLite consensus disorder prediction 105 134 - -
Glsi02g2132 648 ProSitePatterns Glycosyl hydrolases family 1 active site. 459 467 IPR018120 -
Glsi02g2132 648 MobiDBLite consensus disorder prediction 119 134 - -
Glsi02g2132 648 Pfam Glycosyl hydrolase family 1 192 377 IPR001360 GO:0004553|GO:0005975
Glsi02g2132 648 Pfam Glycosyl hydrolase family 1 397 545 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2132 Glsi-ChrGlsi02 71760885 71768096 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2132 6 622 Glycoside Hydrolase AT3G06510 64.571 0.0 859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2132 02 71760885 71768096 Glsi02g2132 02 71760885 71768096 ECH