Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1498 ATGTGCAAATGGATTCCCGTGCATTTGATTGCATATGGGTGTGCATCCATTGGAAAGTACTTTGAGGCACCTTGTGTTTCTAGGTTATTCTCCTTAACCATATATAGTGGACTTGAAATATGGCGTATCGAGAATTTTAATCCGATTCCCGTCCCCAAGTCCTCTTATGGGAAGTTTTTCACTGGGGACTCCTATGTAATCTTGAAGACAACTGCTTCAAAAAGTGGTGCCCTGCGCCATGATATCCATTACTGGCTTGGTAAAGACACCAGTCAGGATGAAGCTGGTGCTGCAGCCATCAAGACAGTTGAGCTGGATGCAGCTCTTGGAGGACGTGCTGTTCAGTACCGTGAAGTGCAGGGTCATGAAACTGAAAAGTTCCTGTCTTATTTCAAACCATGTATTATACCTGAAGAAGGTGGAGTTGCCTCTGGTTTTAAGCATGCTGAGGCTGAAGAACATGAGACACGGATGTTTGTCCCCTTTTCCCGGTCATCACTAAACCATGATGACATATTTATTCTGGATACGAAGTCCAAAATCTTCCAATTTAATGGTTCAAATTCGTCTATTCAAGAAAGGGCTAAAGCATTGGAAGTTGTGCAATATATTAAGGATACCTACCATGATGGGAAATGCGAGGTAGCTGCAATTGAGGATGGAAAGTTGATGGCTGATTCTGAAACTGGAGAATTCTGGAGTTTCTTTGGGGGCTTTGCTCCTCTTCCACGGAAACCAGCCAGTGATGATGATAAGCATGTTGATTCTCATCATCCAAAGCTGTTTTGCGTTGAAAAAGGGAGAGCTGAATCTATTGAGAATGATTCTCTGAGAAGGGAGTTGCTGGACACAAATAAATGCTATATCCTTGATTGTGGGTTGGAGCTGTTTGTCTGGATGGGAAGAAACACCTCTCTTGATGAACGAAAAAGTGCAAGTGGAGCTGCAGAGGAGTTACTTAGTGGCTCTGATCGAATGAATTCCCACATAATACGTGTAATTGAAGGATTTGAAACAGTGATGTTCAGGTCAAAGTTTGACTCTTGGCCTCAGACAACTGATGTAACTGTGTCTGAAGATGGTCGTGGAAAGGTAGCAGCACTTCTTAAGCGTCAAGGAGTGAATGTCAAGGGTCTGTTAAAAGCTGATCCAGTGAAAGAAGAACCTCAACCCTACATTGATTGTACAGGGCATTTGCAGGTTTGGCGTGTGAATGGTCAGGAAAAGATTCTACTTTCTGCTTCTGATCAGTCAAAATTTTATAGTGGAGATTGCTACATCTTTCAATATTCATATCCTGGGGAAGATAAGGAAGAGTATCTTATTGGAACATGGATTGGAAAGACTAGTGTTGAGGAAGAAAGAGCTTCAGCTATTTCACTTGGAAGCAAAATGGTTGAGTCATTGAAGTTTCTGCCTTCCCAGGGTGGACTTAGTGATGGATACAAGACTGACATTGTGGAAAAGGGAATTCCGGATGAGACATATAATGAGGATGGTGTTGCACTATTCCGCATCCAAGGCTCTGGACCGGACAATATGCAAGCTATACAAGTTGAACCAGTTGCTTCATCCTTGAATTCCTCTTATTGCTACATACTTCATAATGGGTCTACTGTCTTTACGTGGACTGGAAGCCTTACAAACTCAGATGTCCAGGAACTTGTTGAGAGGATGTTGGATTTGATAAAGCCGAATTTACAATCCAAACCACAAAAGGAAGGGGCAGAGTCTGAACAGTTTTGGGATTTGTTAGGTGGGAAATCTGAATATCCTAGTCAGAAGATTGTAATGGCCGCTGAAAGTGATCCTCACCTATTTTCGTGCAATTTCTCAAAAGGTGAGGATAGCTTTCTTGCTTGGAAATTTGAAGCAATGATTAATTTGAAGCCATATGTGCAGGTGACAGAGATATACAACTTTTCCCAGGATGATTTGATGACAGAAGATATTTTCATCTTGGATTGTCACAGTGAAATCTTTGTCTGGGTTGGCCAGCAGGTTGACCCCAAGAGTAGAATGCAGGCTCTAACAATTGGTGAGAAATTTCTTGAGCATGATTTTCTTCTACAAAAACCATCTCATGAAACTCCTATATACATTGTCATGGAAGGGAATGAGCCACCTTTCTTCACTCGCTTCTTTACATGGGAGTCTGCAAAGTCTGAAATGTTGGGAAACTCATTTCAAAGGAAGCTTTCAATAGTGAAAAGTGGGGGTACTCCAACTTCAGATAAACCCAAACGAAGAACACCAATATCTTATGGGGGAAGATCTAGCAGTGTACCAGAAAAATCTCAGCGTTCCCGCAGTATGTCTTTTAGTCCAGATCGTGTTCGTGTGCGGGGTAGGTCTCCACAGTTCAATGCTTTGGCAGCTGCATTCGAGAACCCTAATAATGCTAGGAACCTTTCAACACCACCCCCAGTGGCTAGGAAACTGTATCCCAGATCTGTGACCCCAGATTCAGCAAAATCGGCACCTAAATCTGCAGCTATAGCAGCGCTTACTTCTAGCTTTGAACAACCACCTGCAGCACGAAATAGTATTATACCTCGGTCACTTAAAGTGAGTCCAGAGGCCCCCAAACCGAAGCCTGAGACAAATGATAAGGATAATTCTATGAGCAGTAGAATAGAATCTCTTACCATACAGGAAGATGTGAAAGAGGGTGAAGCTGAAGATGAGGAAGGTCTCCCAATTTACCCATATGAACGTCTTAAAATAACATCTACAGATCCTGTTACCGACATTGATGTGACTAAGCGAGAGACTTATCTGTCATCTGCGGAGTTCAAAGAGAAATTTGGGATGACAAAGGATGCCTTTTACAAGTTGCCAAAATGGAAACAGAACAAGCTCAAAATGGCAATCCACTCATGGAGACCAGAGTTATTTTCTTTGCAGCGAGGAACTGAACATATGGAAGTGAAAGGGACAGCATCAGTGGTTTTTTTTAGCATAGCTGCTTCTGCTCCCAAGAAGCTTTACATCATGGACAGAAAAACTACAGATTTTCCACCCTTCTCTTTGCAGTGGTTGAATGTTTAG 3051 0.4238 MCKWIPVHLIAYGCASIGKYFEAPCVSRLFSLTIYSGLEIWRIENFNPIPVPKSSYGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGAAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPEEGGVASGFKHAEAEEHETRMFVPFSRSSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVAAIEDGKLMADSETGEFWSFFGGFAPLPRKPASDDDKHVDSHHPKLFCVEKGRAESIENDSLRRELLDTNKCYILDCGLELFVWMGRNTSLDERKSASGAAEELLSGSDRMNSHIIRVIEGFETVMFRSKFDSWPQTTDVTVSEDGRGKVAALLKRQGVNVKGLLKADPVKEEPQPYIDCTGHLQVWRVNGQEKILLSASDQSKFYSGDCYIFQYSYPGEDKEEYLIGTWIGKTSVEEERASAISLGSKMVESLKFLPSQGGLSDGYKTDIVEKGIPDETYNEDGVALFRIQGSGPDNMQAIQVEPVASSLNSSYCYILHNGSTVFTWTGSLTNSDVQELVERMLDLIKPNLQSKPQKEGAESEQFWDLLGGKSEYPSQKIVMAAESDPHLFSCNFSKGEDSFLAWKFEAMINLKPYVQVTEIYNFSQDDLMTEDIFILDCHSEIFVWVGQQVDPKSRMQALTIGEKFLEHDFLLQKPSHETPIYIVMEGNEPPFFTRFFTWESAKSEMLGNSFQRKLSIVKSGGTPTSDKPKRRTPISYGGRSSSVPEKSQRSRSMSFSPDRVRVRGRSPQFNALAAAFENPNNARNLSTPPPVARKLYPRSVTPDSAKSAPKSAAIAALTSSFEQPPAARNSIIPRSLKVSPEAPKPKPETNDKDNSMSSRIESLTIQEDVKEGEAEDEEGLPIYPYERLKITSTDPVTDIDVTKRETYLSSAEFKEKFGMTKDAFYKLPKWKQNKLKMAIHSWRPELFSLQRGTEHMEVKGTASVVFFSIAASAPKKLYIMDRKTTDFPPFSLQWLNV 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1498 1016 ProSiteProfiles Headpiece (HP) domain profile. 896 961 IPR003128 GO:0003779|GO:0007010
Glsi02g1498 1016 MobiDBLite consensus disorder prediction 736 774 - -
Glsi02g1498 1016 FunFam Villin-like 1 899 961 - -
Glsi02g1498 1016 Gene3D Severin 32 148 IPR029006 -
Glsi02g1498 1016 SUPERFAMILY Actin depolymerizing proteins 492 594 - -
Glsi02g1498 1016 Gene3D Severin 252 361 IPR029006 -
Glsi02g1498 1016 SMART VHP_1 926 966 IPR003128 GO:0003779|GO:0007010
Glsi02g1498 1016 MobiDBLite consensus disorder prediction 736 783 - -
Glsi02g1498 1016 FunFam Gelsolin 29 148 - -
Glsi02g1498 1016 Gene3D Severin 499 594 IPR029006 -
Glsi02g1498 1016 Pfam Gelsolin repeat 277 339 IPR007123 -
Glsi02g1498 1016 Pfam Gelsolin repeat 637 711 IPR007123 -
Glsi02g1498 1016 Pfam Gelsolin repeat 160 221 IPR007123 -
Glsi02g1498 1016 Pfam Gelsolin repeat 47 128 IPR007123 -
Glsi02g1498 1016 FunFam Villin-4 253 359 - -
Glsi02g1498 1016 CDD gelsolin_S1_like 37 141 - -
Glsi02g1498 1016 SUPERFAMILY Actin depolymerizing proteins 35 153 - -
Glsi02g1498 1016 FunFam Gelsolin 500 594 - -
Glsi02g1498 1016 SUPERFAMILY Actin depolymerizing proteins 577 716 - -
Glsi02g1498 1016 CDD gelsolin_S6_like 603 717 - -
Glsi02g1498 1016 SMART VILL_6 621 718 IPR007122 GO:0051015
Glsi02g1498 1016 SMART VILL_6 397 494 IPR007122 GO:0051015
Glsi02g1498 1016 SMART VILL_6 36 134 IPR007122 GO:0051015
Glsi02g1498 1016 SMART VILL_6 259 349 IPR007122 GO:0051015
Glsi02g1498 1016 SMART VILL_6 501 588 IPR007122 GO:0051015
Glsi02g1498 1016 SMART VILL_6 144 239 IPR007122 GO:0051015
Glsi02g1498 1016 Pfam Villin headpiece domain 926 957 IPR003128 GO:0003779|GO:0007010
Glsi02g1498 1016 CDD gelsolin_S4_like 391 476 - -
Glsi02g1498 1016 Gene3D Severin 149 251 IPR029006 -
Glsi02g1498 1016 SUPERFAMILY Actin depolymerizing proteins 157 263 - -
Glsi02g1498 1016 Gene3D Severin 393 486 IPR029006 -
Glsi02g1498 1016 CDD gelsolin_S3_like 259 348 - -
Glsi02g1498 1016 CDD gelsolin_S5_like 499 590 - -
Glsi02g1498 1016 Gene3D Severin 595 730 IPR029006 -
Glsi02g1498 1016 PRINTS Gelsolin family signature 643 665 IPR007122 GO:0051015
Glsi02g1498 1016 PRINTS Gelsolin family signature 328 349 IPR007122 GO:0051015
Glsi02g1498 1016 PRINTS Gelsolin family signature 416 432 IPR007122 GO:0051015
Glsi02g1498 1016 PRINTS Gelsolin family signature 441 459 IPR007122 GO:0051015
Glsi02g1498 1016 PRINTS Gelsolin family signature 514 534 IPR007122 GO:0051015
Glsi02g1498 1016 PRINTS Gelsolin family signature 672 691 IPR007122 GO:0051015
Glsi02g1498 1016 SUPERFAMILY Actin depolymerizing proteins 387 510 - -
Glsi02g1498 1016 PANTHER VILLIN 37 951 IPR007122 GO:0051015
Glsi02g1498 1016 MobiDBLite consensus disorder prediction 838 895 - -
Glsi02g1498 1016 SUPERFAMILY VHP, Villin headpiece domain 886 959 IPR036886 GO:0003779|GO:0007010
Glsi02g1498 1016 Gene3D Villin headpiece domain 899 959 IPR036886 GO:0003779|GO:0007010
Glsi02g1498 1016 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 257 432 IPR036180 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1498 Glsi-ChrGlsi02 13980084 13992575 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g1498 02 13980084 13992575 Glsi13g0857 13 27053205 27055135 CCT
Glsi02g1498 02 13980084 13992575 Glsi02g1498 02 13980084 13992575 ECH