Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1014 ATGGCGAAGCCTCGCAAGCCGAAGAACGAAGATCCCAAGCCCGAGAATTCTGGCGCTGTAGTTCACCACCAAAAGCTCTGTCTCTCCATTGACATGGACAAGCGTCTTGTATATGGGTATACTGAACTGGAAATTGCGGTGCCCGAGATTGGGTTTGTTGGCCTGCACGCGGAAAATTTAGGCATCGAGAATGTTTTGGTTGATGGAGAGCCGGCGGAGTTCGAGTATTACCCGCATCATCAGCAACAAGTGGAGAATGAGAAGAGATGGAGCACGCCATTCTCTCCTAGTTCGGCTGCTGATGTTGCTGGCTCGGTTTATTTGTCTGCGCTAGAAAAAGAACTGGTGCCAAATTTACTGATTAATTGCTGTAAACCTTACAAGACTGAAAGTGAACAGCAGGAGCAGCCCGTTTCTGAAAATGGGTTTCATTCTTCTGGGGAGGAAAAACAGAATGTGAGATCTGTTCGTATTGTCTATTGGATTGAGAAGGCAGAAACAGGAATCCACTTCAAAGACAGTGTTCTTCATACTGATAACCAGTTAAGGAGAGCAAGGTGTTGGTTCCCTTGTATAGATGACAATTTGCAGCAATGCTGTTATGATCTGGAGTTTACGGTTGCACACAATCTTGTGGCTGTCAGCACTGGAAGCTTACTATATCAGGTTTTAAGCAAGGACAATCCTCCTCGGAAAACATATGTCTATAAATTGGATGTCCCTGTCGCTGCAAGGTGGATCTCTTTGGTTGTTGCCCCCTTTCAAATTGTTCCGGACCACCAAGTTAGTCAAATATCACACATGTGTTTGCTACCTAATCTATCAAAGCTACGTAATACTGTGGATTTTTTCCATAGCGCATTCAGTTGCTATAAGGATTACCTTTCTGTGGACTTCCCATTTGACTCATACAAGCAAGTTTTCATAGAGCCGGAGATGGCAGTTTCGTCATTAAGTTTAGGAGCTTCTATTAGTATATTTAGTTCTCAAGTTTTGTTTGATGAGAAGGTTATTGACCAGACTATAGATACGAGGATAAAACTTGCATATGCCCTTGCAAGACAATGGTTTGGTGTTTATATCACCCCTGAGGCAACAAATGATGAGTGGCTCTTGGATGGGCTTGCTGGTTTCTTGACAGATTTTTTTATTAAGAAACATTTGGGAAATAATGAGGCACGATATCGAAGATACAAGGCAAATTGTGCTGTGTGTAAAACTGATAATAGTGGAGTGACAGCTTTGAGCTGTTCAGCCTCTTGCAAGGATTTATATGGAACACAGTGCATAGGTTTATACGGAAAAATAAGATCATGGAAGTCTGTTGCTATTCTTCAGATGTTGGAAAAGCAGATGGGTCCTGAATCTTTCCGTAAAATCTTGCAGACAATAGTTTTTCGGGCTCAAGATAAAACACGTTCCATGAAAACTCTTAGTACTAAAGAGTTTCGACATTTTGCCAATAAGGTTGGAAATCTGGAACGTCCCTTTCTCAAAGAGTTCTTCCCTCGATGGGTTGGTTCGTGTGGATGTCCTGTTCTAAGGATGGGGTTTTCCTATAACAAAAGGAAGAATATGGTTGAAATGGCAGTGATGCGGGGATGCACAGCATTACAAAATTCCAGTGCATCAGTTCTTGATATAAATACAGAAACTGAAAATCGAGATGGAGATGCTGGATGGCCTGGGATGATGAGTATTAGGGTCTATGAACTTGACGGTATGTATGACCATCCAATTTTACCTATGGCTGGAGAAGCATGGCAACTATTGGAAATTCAATGTCACTCAAAGCTTGCTGCTAGGCGCTTCCAAAAGCCTAAGAAAGGTTCAAAACTTGATGGATCTGATGATAATGGTGATGTACCTGCCATGGATATGCGCTCCAGTACCGAGTCTCCTTTATTATGGATCAGAGCAGATCCTGAAATGGAGTACCTTGCCGAGATTCATTTTAATCAGCCAGTTCAGATGTGGATTAATCAATTAGAGAAGGACAAAGATGTTATAGCTCAGGCTCAAGCAATTGCTACCCTAGAGGCGTTGCCTAGGAAATCATTTGCAGTTGTAAATGCCTTAAACAATTTTCTCACTGACTCCAAGGCTTTTTGGAGAGTTCGAATTGAAGCTGCATTTGCTTTGGCTAGTACAGCATCTGAGGAAACTGATTGGGCTGGTCTACTCCATTTGGTGAAATATTATAAGAGTCGTAGGTTTGATCCCGACATTGGACTCCCCAAGCCAAATGACTTTCATGATTTTGCTGAGTATTTTGTTCTTGAGGCCATTCCACATGCTGTAGCTATGGTCAGAGCTGCCGACAAGAAAAGCCCAACAGAGGCTGTGGACTTTGTTTTACAGCTATTAAAGTACAATGACAACAATGGGAACCCTTACTCAGATGTGTTCTGGCTTGCTGCATTGGTCCAGTCAGTTGGTGAGCTCGAGTTTGGGCAACGGAGTATTCTACTTTTATCATCACTCCTGAAGCGCATTGACCGGCTTTTACAATTTGACAGGCTTATGCCAAGCTACAATGGAATCTTGACGGTCAGTTGTATCCGAACCTTGACTCAGATTGCATTAAAGCTTTCGGGGTTCATTCCTCTTGATCGTGTCTATGAACTTGTAAAACCTTTTCGGGACTTAAAGGCAATGTGGCAAGTTCGAATTGAAGCTAGCAGAGCACTCCTTGATCTTGAATTCCATTGCAAGGGAATTGATGCAGCAGTACTATTATTTATCAAATATGTGGAGGAGGAGCCTTCTTTAAGAGGGCAGGTAAAATTAGGCATTCATGTGATGCGGTTATGTCAAATGAGAGGTGGATTGCACTCCAATGATGAAATTTCGAGCCAAACTCTTGTGGCTTTGCTTTCTATACTTGAGGGTCGCATAGCATTCAATAATGTCTTTCTCCGTCACTATTTGTTCTGCATACTACAAATACTTGCAGGAAGACCCCCAACTCTACATGGGGTACCCAGGGAAAATAGAACGTTGCATATGGGTCTTGTGGAAGCTTGCAACTACCAGAGAAATATACTTGTTCTTGATCCAGAAAGTAAACCTCTTGAACCGCCTAACTCTACCCATAACCTGACAGAGGATTTGGGCATGACAGAGGGTTTGAAGGAAGCACTAGCTGAAGCTACAAGGGATGCAAACCCTGAAGCTCCTTCCAAAGATGTGCATGTTGAAACTCCAAAGGAAGCAACCCTTGAGATTCCCAAAGAAGCACATACGGAACCACCACAGGAAGCTCCCAATGAAGTTTCCAAGGAAGCTGATACTGTATCCAATGGCCAAGAGCGGAAGATGCCGGTTGTTAAAATCAGGGTCAAACAATCTTCTGCTGCCAGTAGGGCTGATACTGATAATCAAATGGTTGAACGATCCTTAGGTGGTCGTAATGAAATTGAACGGGCTGCTAGCAGCTCAGTTTCTGTGGATGCACCCAATAGAAATTTTGCAGAGACTGTGAGCATCAGTAATCACAATGTTGAGGAAGTTAATTCTTGGCATGATCGTGGTTCGCGCATGACTGCAAGCATTGGTAGTGCAAAAATTTTGAGCGATGGTGATGAATTGGTCAAAGAACTCCAATGCACTGCTGACTCAAGTGTTGTTTATTCCCCTCGGCCTCTAGATCCATCATCATCTAGCATTATCCAGGACAACAATATAGATGCTGATGCACGGCGTTATGTCAGCCTCCAAGCTCTTTCAGTTGCAAGACCTGATCTTGATGGAGAGTCATTGGCCAGAGATATTTCTGTTTATGGGAAAGAAAAGAAAAAAGGCAAGGAAAAAAGACGGAAGCGGGAAGACCATAAAGGGCGCCAAGATGATCCAGAATATTTGGAAAGAAAACGATTGAAGAAAGAGAAAAAACGCAAGGAAAAAGAGATGGCTAAACTGCAGAGTGATGAACCAAAGAGACCTTTGATAGAGTTGTCAAGTAAGAAAGAGGAACCTGAGATGGACTCTACTATGCAACTAAAAGCCGTTGAACCCAGTGTATCTAAATTAGAAATCAGAAGGGTTGATACCAAACCTGAAGCATCAGAAGGAACTTCTGCGGCACCAAAATTTAGAATTAAAATTAAAAACCGAGCGCTCAGCAAGACGTAG 4134 0.4272 MAKPRKPKNEDPKPENSGAVVHHQKLCLSIDMDKRLVYGYTELEIAVPEIGFVGLHAENLGIENVLVDGEPAEFEYYPHHQQQVENEKRWSTPFSPSSAADVAGSVYLSALEKELVPNLLINCCKPYKTESEQQEQPVSENGFHSSGEEKQNVRSVRIVYWIEKAETGIHFKDSVLHTDNQLRRARCWFPCIDDNLQQCCYDLEFTVAHNLVAVSTGSLLYQVLSKDNPPRKTYVYKLDVPVAARWISLVVAPFQIVPDHQVSQISHMCLLPNLSKLRNTVDFFHSAFSCYKDYLSVDFPFDSYKQVFIEPEMAVSSLSLGASISIFSSQVLFDEKVIDQTIDTRIKLAYALARQWFGVYITPEATNDEWLLDGLAGFLTDFFIKKHLGNNEARYRRYKANCAVCKTDNSGVTALSCSASCKDLYGTQCIGLYGKIRSWKSVAILQMLEKQMGPESFRKILQTIVFRAQDKTRSMKTLSTKEFRHFANKVGNLERPFLKEFFPRWVGSCGCPVLRMGFSYNKRKNMVEMAVMRGCTALQNSSASVLDINTETENRDGDAGWPGMMSIRVYELDGMYDHPILPMAGEAWQLLEIQCHSKLAARRFQKPKKGSKLDGSDDNGDVPAMDMRSSTESPLLWIRADPEMEYLAEIHFNQPVQMWINQLEKDKDVIAQAQAIATLEALPRKSFAVVNALNNFLTDSKAFWRVRIEAAFALASTASEETDWAGLLHLVKYYKSRRFDPDIGLPKPNDFHDFAEYFVLEAIPHAVAMVRAADKKSPTEAVDFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQRSILLLSSLLKRIDRLLQFDRLMPSYNGILTVSCIRTLTQIALKLSGFIPLDRVYELVKPFRDLKAMWQVRIEASRALLDLEFHCKGIDAAVLLFIKYVEEEPSLRGQVKLGIHVMRLCQMRGGLHSNDEISSQTLVALLSILEGRIAFNNVFLRHYLFCILQILAGRPPTLHGVPRENRTLHMGLVEACNYQRNILVLDPESKPLEPPNSTHNLTEDLGMTEGLKEALAEATRDANPEAPSKDVHVETPKEATLEIPKEAHTEPPQEAPNEVSKEADTVSNGQERKMPVVKIRVKQSSAASRADTDNQMVERSLGGRNEIERAASSSVSVDAPNRNFAETVSISNHNVEEVNSWHDRGSRMTASIGSAKILSDGDELVKELQCTADSSVVYSPRPLDPSSSSIIQDNNIDADARRYVSLQALSVARPDLDGESLARDISVYGKEKKKGKEKRRKREDHKGRQDDPEYLERKRLKKEKKRKEKEMAKLQSDEPKRPLIELSSKKEEPEMDSTMQLKAVEPSVSKLEIRRVDTKPEASEGTSAAPKFRIKIKNRALSKT 1377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1014 1377 MobiDBLite consensus disorder prediction 1263 1340 - -
Glsi02g1014 1377 Gene3D tricorn interacting facor f3 domain 20 251 IPR042097 -
Glsi02g1014 1377 MobiDBLite consensus disorder prediction 1276 1292 - -
Glsi02g1014 1377 SUPERFAMILY ARM repeat 444 908 IPR016024 -
Glsi02g1014 1377 MobiDBLite consensus disorder prediction 1300 1331 - -
Glsi02g1014 1377 MobiDBLite consensus disorder prediction 1050 1090 - -
Glsi02g1014 1377 Pfam Peptidase family M1 domain 282 479 IPR014782 GO:0008237|GO:0008270
Glsi02g1014 1377 Coils Coil 1288 1310 - -
Glsi02g1014 1377 MobiDBLite consensus disorder prediction 1050 1102 - -
Glsi02g1014 1377 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 273 515 - -
Glsi02g1014 1377 MobiDBLite consensus disorder prediction 607 621 - -
Glsi02g1014 1377 CDD M1_like_TAF2 23 506 - -
Glsi02g1014 1377 Gene3D Neutral Protease Domain 2 259 510 IPR027268 -
Glsi02g1014 1377 MobiDBLite consensus disorder prediction 606 627 - -
Glsi02g1014 1377 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 1 1300 IPR037813 GO:0005669
Glsi02g1014 1377 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 17 252 IPR042097 -
Glsi02g1014 1377 FunFam Transcription initiation factor TFIID subunit 2 121 251 - -
Glsi02g1014 1377 Gene3D - 651 925 IPR011989 -
Glsi02g1014 1377 FunFam Transcription initiation factor TFIID subunit 259 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1014 Glsi-ChrGlsi02 6747958 6768054 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g1014 02 6747958 6768054 Glsi02g1014 02 6747958 6768054 ECH