Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1004 ATGTTACAAAGCCATAAAGCACTGAGATCTTCTCCTCAACCCTTCCTCAATCTTCCAACTCAGACGTTAACGCCATCGCCTTCTTCACCATTCCCATTAGCACCCACTTCTCCATCTTCTTTTCCCATCCTCAAACACCAATGCAGATTATCACGCCGAGAGCTCACAATTTACAGCAGCAACTCTTGCTTGCTGCTTCTTCTGGGTGTACAAGCACTGGTTCCACCCACTTCAAGAGCTGAAGAAAACCTCACCAACACAACCAAAGGTGATCAACCTGAGGAGAATTTGACTGACAATGCTAGCTGCACAGAAAGAAAGCCCACTAAACAAGTGTTCTTAGACATAGCCATTGATGGTGAACCCGCTGGTCGCATTACCATAGGGCTATATGGAGATGATGTCCCTACAGGGGTCGACAGGTTTAGTAAGATTGTCAGTGGAGCTGCTGGCATTAGCTACAGAAGAAAAGAGTTCATCAAAATCATGCCCAATTACGTTCAGCATGGTGGGCTTAGATCCTATGGAGTGGATGCTGAACTTGCAAATGGTACAGGAAGCAGTTTGGCAACTGAGAGTCTTGTTGAAGAATGGGAGAGAACCTACGAGAGATGCCCTGGGACTAAGAATGCGGCCGGAAGTGTAGGCATTATTGTGCGAGATCCATCAAAACCCCCTCCCAAGTTGAAGCTGGTTGCAAGAAAAGGGAAGCTGGAGATTGATCAAGAGGAGGTTGGAATTGAACCCAATGGGACGGAATTTGTGATTGCCACAAAGGATTCACCAGAATTGGATGCATCAGCTCTAGTGATTGGAAGAGTAGTTGGAGGAATGCAGGTTGTGCAGAGGATTGGTCAAGTGAAAACAGTACAGGAGAATACCAGTTCTCCTTATTTTAGGGTTGCAAAGCTAATTGGAGACAAAAGGGCTGTTGTAGCAGAAAGAGGATTCAACCGCCCTTATTCAAAAGTTGTTGTTACAAACTGTGGTGTATTGGAGTAA 1002 0.4561 MLQSHKALRSSPQPFLNLPTQTLTPSPSSPFPLAPTSPSSFPILKHQCRLSRRELTIYSSNSCLLLLLGVQALVPPTSRAEENLTNTTKGDQPEENLTDNASCTERKPTKQVFLDIAIDGEPAGRITIGLYGDDVPTGVDRFSKIVSGAAGISYRRKEFIKIMPNYVQHGGLRSYGVDAELANGTGSSLATESLVEEWERTYERCPGTKNAAGSVGIIVRDPSKPPPKLKLVARKGKLEIDQEEVGIEPNGTEFVIATKDSPELDASALVIGRVVGGMQVVQRIGQVKTVQENTSSPYFRVAKLIGDKRAVVAERGFNRPYSKVVVTNCGVLE 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1004 333 FunFam Peptidyl-prolyl cis-trans isomerase B 102 333 - -
Glsi02g1004 333 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP26-2, CHLOROPLASTIC 1 333 IPR044185 -
Glsi02g1004 333 Gene3D - 99 333 IPR029000 -
Glsi02g1004 333 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 113 331 IPR002130 GO:0000413|GO:0003755
Glsi02g1004 333 MobiDBLite consensus disorder prediction 82 104 - -
Glsi02g1004 333 MobiDBLite consensus disorder prediction 1 34 - -
Glsi02g1004 333 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 114 296 IPR002130 GO:0000413|GO:0003755
Glsi02g1004 333 SUPERFAMILY Cyclophilin-like 108 332 IPR029000 -
Glsi02g1004 333 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1004 Glsi-ChrGlsi02 6669507 6670691 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g1004 02 6669507 6670691 Glsi02g1004 02 6669507 6670691 ECH