Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0956 ATGGTGAGATTGAAATTAAAATCCTTGATGTTTCACCCTCTTCCAGTATGTCTTATCAAACCGAAGAGGGAAAAGAAAAGGCTATCAGTAAGAAACCTCATGGGACAGTCTTTAATTACGAAGAAAGTGACATATTTTAACGATACTGAACCAGCCAAATGGCAGTTAGCCATCAAGTTGAACAGAGGTGGTGGGTTCCTAGCAGCAGATGCCAGACAATGTTGGACGACAAATCTTTTGGCTCCACATTTGACGTTGTTCCCTTGTGGAATAATTGGGGGTTTGTGCAGAGTTTCCAAACCCCTATTGCTCCCACTGATCAGTCCCGCTACGCAAGCCTCGGCGTTAAGGCAGATGGGTTGGGCTATTGCTCTTCATGGCGGCGCTGGCGTCCCACTTTCGTTGCCACCGGAACGTCGTCAGCCCCGCGAGGAAGCCCTCCGCCACTGCCTGCAAATCGGGGTCGAAGCTCTCGAGGCCAAAAAGTCTCCCTTGGACGTAGTAGAACTTGTGGTTCGTGAATTAGAGAACTGTCCACATTTTAATGCGGGTAGGGGATCTGTGCTGACCGCCAAAGGCACAGTTGAAATGGAAGCTGCTATCATGGATGGCAACACTAAGAACTGTGGAGCTGTTTCTGGGCTCACTACTGTTGTAAATGCTATATCTTTAGCTCGACTGGTCATGGAGAAGACTCCTCATATATTTCTAGCATTTGACGGGGCAGAGGAATTTGCAAAGGAACAAGGTGTTGAGACTGTAGATTCAAGCCATTTTATTACTTCCGAAAATATTGAAAGACTAAAGCAGGCAAAGGAAGCCAATAGGGTCCAGATTGATTACACCCAACACATCCAAAATGATGCTAAGAAAGAAACACCAATTGCTAATGGTGATAGTCAACTTGGAACTGTTGGGTGTGTGGCTGTTGATAATCATGGGAATCTAGCTTCTGCAACATCTACAGGTGGATTAGTGAACAAAATGGTTGGTAGAATTGGTGACACGCCTCTAATAGGTGCCGGGACATACGCCAATGAGCTTTGTGCAGTTTCTGCCACGGGCCAAGGTGAAGCAATAATTCGTGGGACTGTTGCAAGAGATGTGGCAGCCCTGATGGAGTTCAAAGGTCTATCTCTTGAGGAAGCAGCTAACATTGTTGTTCAGGAGCGCACCCCAAAAGGCACTGTTGGCTTAGTTGCTGTGTCTGCTGCTGGAGAAATTGCAATGCCTTTTAACACACCAGGCATGTTCAGAGCAGGTGCTACTGAAGATGGGTTTTCGGAGATTGCAACTTGGCCGTCTGCCTAA 1311 0.4691 MVRLKLKSLMFHPLPVCLIKPKREKKRLSVRNLMGQSLITKKVTYFNDTEPAKWQLAIKLNRGGGFLAADARQCWTTNLLAPHLTLFPCGIIGGLCRVSKPLLLPLISPATQASALRQMGWAIALHGGAGVPLSLPPERRQPREEALRHCLQIGVEALEAKKSPLDVVELVVRELENCPHFNAGRGSVLTAKGTVEMEAAIMDGNTKNCGAVSGLTTVVNAISLARLVMEKTPHIFLAFDGAEEFAKEQGVETVDSSHFITSENIERLKQAKEANRVQIDYTQHIQNDAKKETPIANGDSQLGTVGCVAVDNHGNLASATSTGGLVNKMVGRIGDTPLIGAGTYANELCAVSATGQGEAIIRGTVARDVAALMEFKGLSLEEAANIVVQERTPKGTVGLVAVSAAGEIAMPFNTPGMFRAGATEDGFSEIATWPSA 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0956 436 Gene3D (Glycosyl)asparaginase 304 436 - -
Glsi02g0956 436 CDD Asparaginase_2 122 426 - -
Glsi02g0956 436 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 139 433 IPR029055 -
Glsi02g0956 436 Pfam Asparaginase 121 433 IPR000246 GO:0016787
Glsi02g0956 436 PANTHER L-ASPARAGINASE 120 420 IPR000246 GO:0016787
Glsi02g0956 436 FunFam Isoaspartyl peptidase/L-asparaginase 304 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0956 Glsi-ChrGlsi02 6364040 6366984 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0956 123 415 Miscellaneous Gene Families AT4G00590 25.305 3.54e-18 84.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0956 02 6364040 6366984 Glsi02g0956 02 6364040 6366984 ECH