Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0949 ATGCGACGACGGGCGGCCGAGTATCGGCGCCCGGTTCGACGGAGGTTTTCTTATTGGATCTCGTTGCTTCTTGGGTTGTTCTGCATTGTGGGTTTGGTTTTATTTGTTGTACAACACAATCATCATGAAGATCGGGTCGAGCATCCGGTGCTGGAGAGAATTGCAAGAGTTGAACATGTTACTAAGCAGAGTTTGAATTTTACAGAAGAAATATTTAGTGCAATCTCGTTTTCACGGCAGTTAGCAGAACAAATGACTTTGGCCAAAGCTTATGTAATAATCGCCAGAGAGCACAATAACCATCACCTAGCCTGGGAGCTTTCCTCAAAGATCAGAAGTTGTCAGCTTTTGCTTTCAAAAGCTACCATGAGAGGGAAGCCAATCACACTGGAGGAAGCAGAGCCAATTATTAGAAGCATATCTTCTCTAATTTTCAAGGCACAAAATAACCATTATGATGTTGCGACGACATTAATGACGATGAAATCACGTATTCAAGCTCTTGAAGAGCAAGCACATGCGGCATCAGTTCAAAGTAGCGTGTTTGGTCAAGTAGCAGCTGAAGCACTGCCCAAGAGCCTTCATTGCCTAAATATCAAACTTATGTCTGATTGGGTCAAGATGCCATCCCTGCGAGAACTCTTGGATGAGAAGAGAAACTCCCCACGTCTCATTGATAAAAATCTGTATCATTTCTGCATTTTTTCAGATAATGTACTGGCTACATCTGTAGTTGTAAACTCCACAGTCTCCAATGCTGACAGTCCAACACTGTTTGTCTTTCACATTGTCACTAATGGAGTCCACTATTGTGCAATGCAAGCATGGTTTCTCGGTAATGACTTTAAAGGGGCCACCATAGAAGTACAGAATATTGAGAAGTTTCATTGGTTGAATGCGTCTTATTCACCTGTTCTCAAGCAGCTCCTCAATGAAGACTCCCGTGCCTTCTATTTTGAGGGATATCATGATGCAAATGTTGATCCAAAACTGCGGAACCCCAAGTACATGTCTATAATGAATCATCTTCGTTTTTACATCCCTGAGATCTATCCACAGCTTGAGAAGGTTGTTTTCCTTGATGATGATGTTGTTGTCCAGAAGGATCTGACCTCACTTTTCTCTTTGGATCTGCATGGAAATGTGAATGGTGCAGTTGAAACTTGCCTTGAATCATTTCATCGTTTTCATAAGTATCTCAACTTCTCAAATTCAATAATAAGCTCCAAGTATGATCCTCAGGGATGTGGATGGGCATTTGGTATGAACGTTTTCGACTTGGTTGCATGGAAGAAAGCAAATGTGACTGGAAGATATCACTATTGGCAGCAACAGCAAAATGCTGATGGGACACTTTGGAAGCTGGGTACTCTTCCTCCTGGTCTTCTAAGTTTATATGGTCTGACAGAGCCACTTGACAGGAGATGGCATGTTTTAGGATTGGGGTATGACCTAAATATTGACAACCACCTGATTGAAAGTGCGGCAGTGATTCACTTCAACGGCAACATGAAGCCATGGCTGAAGTTGGGTATTGACAGGTATAAGCCCCTATGGAATCGGTACATAAATCAAAGTCACCCTCATCTTCGATATTGTGACACAAGTTGA 1611 0.4233 MRRRAAEYRRPVRRRFSYWISLLLGLFCIVGLVLFVVQHNHHEDRVEHPVLERIARVEHVTKQSLNFTEEIFSAISFSRQLAEQMTLAKAYVIIAREHNNHHLAWELSSKIRSCQLLLSKATMRGKPITLEEAEPIIRSISSLIFKAQNNHYDVATTLMTMKSRIQALEEQAHAASVQSSVFGQVAAEALPKSLHCLNIKLMSDWVKMPSLRELLDEKRNSPRLIDKNLYHFCIFSDNVLATSVVVNSTVSNADSPTLFVFHIVTNGVHYCAMQAWFLGNDFKGATIEVQNIEKFHWLNASYSPVLKQLLNEDSRAFYFEGYHDANVDPKLRNPKYMSIMNHLRFYIPEIYPQLEKVVFLDDDVVVQKDLTSLFSLDLHGNVNGAVETCLESFHRFHKYLNFSNSIISSKYDPQGCGWAFGMNVFDLVAWKKANVTGRYHYWQQQQNADGTLWKLGTLPPGLLSLYGLTEPLDRRWHVLGLGYDLNIDNHLIESAAVIHFNGNMKPWLKLGIDRYKPLWNRYINQSHPHLRYCDTS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0949 536 CDD GT8_like_1 230 524 - -
Glsi02g0949 536 Coils Coil 158 178 - -
Glsi02g0949 536 SUPERFAMILY Nucleotide-diphospho-sugar transferases 230 531 IPR029044 -
Glsi02g0949 536 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 59 534 IPR029993 GO:0047262
Glsi02g0949 536 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 232 532 IPR029044 -
Glsi02g0949 536 FunFam Hexosyltransferase 232 529 - -
Glsi02g0949 536 Pfam Glycosyl transferase family 8 234 509 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0949 Glsi-ChrGlsi02 6334546 6339015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0949 1 534 Glycosyltransferase AT2G20810 54.174 0.0 583
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0949 02 6334546 6339015 Glsi02g0949 02 6334546 6339015 ECH