Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0922 ATGGCCCAAAACAAAAGAGCTCCAAGCGTTCTTGACTCTATAGGGGAGGAAATTGTTAGAATCATTGCACCAGTATCAATCTGCATGTTTTTGGTAGTTCTGTTGGTTTCAATCCTTGATACCAACTCTTCTTCAGCATCAATCTCCAGTATAGCCACTGTGGCATATAGTGAGACCAGCTCAGACTCTTCCTGGGACAAATTCGTAGGTGCCCTTTTGAACTCCTTGGCGTTTGTTGCTGTTGTCACTGTTGTAACGTTTGTTTTGGTCCTTCTCTTCTATCTTAGATGCACCAATTTCTTAAAACTATATATGGGTTTCTCTTCTTTTGTTGTTTTGGGATTCTTGGGAGGTGAAATTGCATTGTTCTTAATTGAAGATTTTAGCATTCCTATTGATTGCATAACATTTCTTCTGGTTTTGTTTAATTTTTCTGTTGTTGGTGTATTGGCTGTCTTTATGTCCAAAATGGAAATTCTTGTGACACAAGGATACTTGGTTCTTATTGGAATGTTGGTTGCTTATTGGTTTACTATGTTACCTGAATGGACCACGTGGGTGCTTCTGGTTGCCATGGCATTGTATGATCTTGCTGCAGTTTTATTACCTATTGGGCCACTAAGGCTCTTGGTAGATCTTGCAATATCAAGAGATGAAGAAATTCCTGCATTGGTCTATGAGGCTAGGCCAGTGAACAATGATAATTTGGATCCAAGGGATGGTGTAACTCAGAGGAGGACGTGGAGAGATAGGAGGATTGAGAATTCAATTCTTCAAACTGATTCCAACCCAAATGTCAATTCTGCATCGGGTGACAGTCAGAATACTGAATCAAACTCCAATCTGGATGCAACCACTGCTATTAACCCAGATTTGATCAGAAATACTTCTGAGGGCACGCATGAAGACACAAATTTGGTTAGGGAAAATGCTGTTTCAAATTCAAACTTGAATTTAAATCCTTCTACTGCCCTCTATAATGACAGAAATTTGGTCAGAGCTGAAGAGGGACGGGTTTTAGAAACTGATTCAGAGCTGTCTGCACCCTTGCTTGATCATGGAATGAATATCCAGCTCCACAGAGCAGATGATGCAGTGCCTAATGAAAGCTTGATGCTAGAGGGAATTGGATTGGGGTCTTCTGGTGCAATCAAGCTAGGGCTGGGAGATTTCATTTTCTATAGTGTTTTGGTTGGCAGGGCAGCGATGTATGATTATATGACAGTGTATGCATGTTATCTAGCTATCATTGCTGGCCTGGGCATCACTTTGATGCTATTGGCATTATATCAGAAAGCTTTGCCTGCTCTTCCAGTGTCAATAATACTGGGCGTCTTGTTTTATATATTGACCAGGTTCTTACTTGAAGTATTTGTTGTACAATGTTCCTTGAACCTCCTGATGTTCTGA 1410 0.4057 MAQNKRAPSVLDSIGEEIVRIIAPVSICMFLVVLLVSILDTNSSSASISSIATVAYSETSSDSSWDKFVGALLNSLAFVAVVTVVTFVLVLLFYLRCTNFLKLYMGFSSFVVLGFLGGEIALFLIEDFSIPIDCITFLLVLFNFSVVGVLAVFMSKMEILVTQGYLVLIGMLVAYWFTMLPEWTTWVLLVAMALYDLAAVLLPIGPLRLLVDLAISRDEEIPALVYEARPVNNDNLDPRDGVTQRRTWRDRRIENSILQTDSNPNVNSASGDSQNTESNSNLDATTAINPDLIRNTSEGTHEDTNLVRENAVSNSNLNLNPSTALYNDRNLVRAEEGRVLETDSELSAPLLDHGMNIQLHRADDAVPNESLMLEGIGLGSSGAIKLGLGDFIFYSVLVGRAAMYDYMTVYACYLAIIAGLGITLMLLALYQKALPALPVSIILGVLFYILTRFLLEVFVVQCSLNLLMF 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0922 469 SMART psh_8 69 455 IPR006639 GO:0004190|GO:0016020
Glsi02g0922 469 Gene3D Presenilin 377 461 IPR042524 -
Glsi02g0922 469 PRINTS Presenilin family signature 22 32 IPR001108 GO:0004190|GO:0016020|GO:0016485
Glsi02g0922 469 PRINTS Presenilin family signature 179 186 IPR001108 GO:0004190|GO:0016020|GO:0016485
Glsi02g0922 469 PRINTS Presenilin family signature 196 213 IPR001108 GO:0004190|GO:0016020|GO:0016485
Glsi02g0922 469 PANTHER PRESENILIN 5 469 IPR001108 GO:0004190|GO:0016020|GO:0016485
Glsi02g0922 469 MobiDBLite consensus disorder prediction 257 295 - -
Glsi02g0922 469 Pfam Presenilin 15 459 IPR001108 GO:0004190|GO:0016020|GO:0016485
Glsi02g0922 469 MobiDBLite consensus disorder prediction 253 300 - -
Glsi02g0922 469 FunFam Presenilin 359 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0922 Glsi-ChrGlsi02 6140958 6142367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0922 1 469 Miscellaneous Gene Families AT2G29900 59.236 5.93e-165 469
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0922 02 6140958 6142367 Glsi02g0922 02 6140958 6142367 ECH