Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0911 ATGTATCAGAGGTTATTAGGCAAAGTTGCATTGGTTACAGGTGGGGTCACTGGAATTGGAGAAAGCATTGTCTGCCTCTTCCATGTCCATGGTGCCAAAGTTTGTATAGTTGATGTGCAAGATAACCTTGGAATGCACGTTTGTCAACAATGCTGGAATGCTGTTGAAGTAGAGTTTTCCTTTGTGTTCTGTACTGGTTTAGTCTCTTCTTCATTCATGTGTGTCTCATCTTTTCCTACCGTTTTAGTGATTGTGTATAGCGATCAACTTCCAATCCTTCCATTTATTCTGCACCCGCGTTGGGGATCCATTGGTGTCACGACGATATTCATTCCCATATATGAAAGCGAGGGAGCAGAAGGAACTAGTTCAGGCTCGTGCCCAGTATTTCAGGCCTGTACAATCAGAAAGAACAATATATTAGGTGCCACTTGGTGCGTTTGCAAGGATGGAAGCGACACAGTCCTGCAGAAGACCTTGGACTATGCCTATGGAGTTGGAGCTGACTGTAACCCCATCCGTCAAAATGGGCCTTGTTTCGAACCCAACGCCGTTAGGGCTCACTGCAACTATGCCGTCAACAGTTATTTCCAAAGAAAGGGTCAAACGCCACAGGCCTGTGAGTTTGCAGGAATAACCACCATTACTACATCTGACCCCAGCAGTTCCGGTTGTGCCTACCCTTCAAGCGTCATCATGTCCAATTCATCACCCACACCTTCGTCTGTTTTGTTTCCTTTAGTTTCTAAGAGTGAGAACCGCAAGGACCTGTTGAGTACGCTGTTGTCGCTTAAGGAGGTCCAGGATGATGAAGGAACCAAGCTCACTGACACGGAGATCAAAGCACTCCTTTTGCTATCTATGTATCAGAGGTTATTAGGCAAAGTTGCATTGGTTACAGGTGGGGTCACTGGAATTGGAGAAAGCATTGTCTGCCTCTTCCATGTCCATGGTGCCAAAGTTTGTATAGTTGATGTGCAAGATAACCTTGGAATGCACGGTAAAGAAGCGGAGGGTGAAAACGCCAGTAGATCAAAAAAGCAGTCGCAAGCCGACACCAGAAGAGGCCCCTATCCTAGGTCATATATATTTTGTCTTCATATTCTTCGCCACTCTCATCCGAGCTCACACTGTCGCGCGCTTACCATTCTCTCTCCCTCTCAGCTGTACCGCGCTTTCTACCTGGGCACCAATCCTACCTCTTCTATTCTAACCCATCTCTTCTCTGCCTTTAGCATGGCTGATTTAGTTCTTGCAGTGATTCTTTTGGCCTTGACTGGCTCTTCACGTGCCACTTGGTGCGTTTGCAAGGATGGAAGCGACACAATCCTGCAGAAGACCTTGGACTATGCCTGTGGAGTTGGAGCTGACTGTAACCCCATCCGTCAAAATGGGCCTTGTTTCGAACCCAACGCCGTTAGGGCTCACTGCAACTATGCCGTCAACAGTTATTTCCAAAGAAAGGGTCAAACGCCACAGGCCTGTGAGTTTGCAGGAATAACCACCATTACTACATCTGACCCCAGCAGTTCCGGTTGTGCCTACCCTTCAAGCGTCATCGCTTTAGGCACTAGTTCAACCCCTCTCTTTAGATTAGTTGCTTTCCCAAGATTAAAGGGTCAGTTATCTAGTAGAAGGTTATTAGGAAAAGTGGCATTGGTTATTGATGGGGTCACTGAAATTGGAGAAAGCATTGTATGCCTCTTCCATGCCCATGGTGCCAAAGTTTGTCAATCCCTCGGTGGAGACACAAATGTTTGTTTGTACCATTGGGATGTTACAGCAAAGGATGATGTTCGCTCTACAGTGGACTTCACAGTGGGAAAATTTGGCACACTTGACATTATAGTCAACAATGCTGGAGTTTCTGAACTACCCTGTCCTGATATCCGTAATGCGAATTTATCTGAATTTGAGAAGGTTATGAAAGATGCCAAATCATTGTATTTGTAG 1953 0.4603 MYQRLLGKVALVTGGVTGIGESIVCLFHVHGAKVCIVDVQDNLGMHVCQQCWNAVEVEFSFVFCTGLVSSSFMCVSSFPTVLVIVYSDQLPILPFILHPRWGSIGVTTIFIPIYESEGAEGTSSGSCPVFQACTIRKNNILGATWCVCKDGSDTVLQKTLDYAYGVGADCNPIRQNGPCFEPNAVRAHCNYAVNSYFQRKGQTPQACEFAGITTITTSDPSSSGCAYPSSVIMSNSSPTPSSVLFPLVSKSENRKDLLSTLLSLKEVQDDEGTKLTDTEIKALLLLSMYQRLLGKVALVTGGVTGIGESIVCLFHVHGAKVCIVDVQDNLGMHGKEAEGENASRSKKQSQADTRRGPYPRSYIFCLHILRHSHPSSHCRALTILSPSQLYRAFYLGTNPTSSILTHLFSAFSMADLVLAVILLALTGSSRATWCVCKDGSDTILQKTLDYACGVGADCNPIRQNGPCFEPNAVRAHCNYAVNSYFQRKGQTPQACEFAGITTITTSDPSSSGCAYPSSVIALGTSSTPLFRLVAFPRLKGQLSSRRLLGKVALVIDGVTEIGESIVCLFHAHGAKVCQSLGGDTNVCLYHWDVTAKDDVRSTVDFTVGKFGTLDIIVNNAGVSELPCPDIRNANLSEFEKVMKDAKSLYL 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0911 650 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 54 IPR036291 -
Glsi02g0911 650 SMART X8_cls 144 227 IPR012946 -
Glsi02g0911 650 SMART X8_cls 432 515 IPR012946 -
Glsi02g0911 650 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 288 329 IPR036291 -
Glsi02g0911 650 PANTHER BETA-1,3 GLUCANASE 420 526 IPR044788 -
Glsi02g0911 650 MobiDBLite consensus disorder prediction 335 353 - -
Glsi02g0911 650 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 546 642 IPR036291 -
Glsi02g0911 650 Pfam Enoyl-(Acyl carrier protein) reductase 575 642 - -
Glsi02g0911 650 Gene3D - 286 368 - -
Glsi02g0911 650 MobiDBLite consensus disorder prediction 335 355 - -
Glsi02g0911 650 Pfam short chain dehydrogenase 8 64 IPR002347 -
Glsi02g0911 650 Gene3D - 1 71 - -
Glsi02g0911 650 FunFam Glucan endo-1,3-beta-glucosidase 4 427 519 - -
Glsi02g0911 650 Gene3D - 131 238 - -
Glsi02g0911 650 Gene3D - 428 523 - -
Glsi02g0911 650 Gene3D - 538 643 - -
Glsi02g0911 650 Pfam X8 domain 432 500 IPR012946 -
Glsi02g0911 650 Pfam X8 domain 144 212 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0911 Glsi-ChrGlsi02 5912827 5944869 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0911 428 518 Glycoside Hydrolase AT1G66250 45.161 9.37e-22 97.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0911 02 5912827 5944869 Glsi02g0911 02 5912827 5944869 ECH