Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0871 ATGGGTCCGACTGAAGATCAATCGGAAATAGTATTCTTCGACGTAGAGACCACTGTCCCAACCAAACCCGGCCAGGGTTATGCCATTTTGGAGTTCGGAGCCATCTTGGTTTGCCCCAGGAAGCTAACGGAGCTCCATAGTTACGCCACCTTGGTCCGACCTACTGATCTTTCTCGCATCTCACCCTTGTCCAAACGCTGCAATGGCATTAGCCGTCATGATGTTGCGTCGGCTCCTACTTTCGCCGATATCGCCGATACGGTTTATCATCTTCTGCATGGCCGGATTTGGGCGGGTCACAATATCTTAAGATTTGACTGTGTTCGGATCAGAAATGCATTCGCTGAGATTAATAGGCCAGCACCAGAACCCAAGGGTATTATTGACTCACTAGTCCTGTTAACTCAAAGGTTTGGAAGAAGAGCTGGTGATATGAAGATGGCTACTCTTGCAACATATTTTGGGCTTGGACAGCAGACACATAGGAGCTTAGATGATGTTCAGATGAATCTTGAAGTCCTCAAATACTGTGCAACAGTTCTATTCTTAGAGTCAAGTCTGCCAGATATATTTACAGAAAATTGTTTGGTTTCTCCAAATGCTTCTACAAGAAGTAGTAGTAATAGAAAATCTTCCCCAGAGGAGGTCTCATCAAATATGGAAATGGATTCTGTGTCAATATCATCTTCAAATCAAACTAAGGAGGAAAATCCTCCTAAACTTTCTTTTACAATGTGCAACTCTAAGGAGACAATATCCAACATGGCCAATCCTGATATAGTTCAGCCAGATCCTTTTGACTTGAGATCTCTTAGTGATGAAATGAAAAGAGAATCCACTGAAAATCCTGTGCTAGAGTCAGCTAAGATGTCTTCTACGGCTGCTGTGTCTGAAGCCTGCAGTAGCTCTATTATTGCTATAGAGCCTGATGAAATATGTATCCCCTCTATCAGTGCATCTCTTGTTCCATTTTTCCATGGAAGTCAAAAGATAGAATTATTGCACAAAGGTGTCTCCTTTCAGCTTTGTTGTCCTAGTTTGAAAGTACGGTTTGGAATAAATACAAAGTTTGTCGATCATGCTGGCTGGCCACGGTTGAGTTTTGTGGTTGATCCATCACCAAATTTATGTAAGGTTCTTGATGCATGTGACAGTGTTGCACAGAGATTGTCTTTGGATTCTGGTAGCACCTCTGATTGGAGATCAGTTGTTACCAGGAAAAATGGCTTCTGCAACTATCCTACTGTGAGATTACATATACCAACAACTGTGTGCGGGGACATGGCCATCTATGCTACAGAGATATACGAAAGAGAATCATCTGGCAATGTCCAAAGACTTCGCTTCAGTAAGTTTGATGCTGCCGAACTTTGTTCCTTGTTCATGCCTGGAACAATTGTCGATGCATTCATTTCCTTAGATCCATATGACTATCAGCAGAATGCAGGAATTAAATTAGTTGCCAAAAAATTGCTAATTCATAGCAAGCAGAAGGAAGATTAG 1503 0.4218 MGPTEDQSEIVFFDVETTVPTKPGQGYAILEFGAILVCPRKLTELHSYATLVRPTDLSRISPLSKRCNGISRHDVASAPTFADIADTVYHLLHGRIWAGHNILRFDCVRIRNAFAEINRPAPEPKGIIDSLVLLTQRFGRRAGDMKMATLATYFGLGQQTHRSLDDVQMNLEVLKYCATVLFLESSLPDIFTENCLVSPNASTRSSSNRKSSPEEVSSNMEMDSVSISSSNQTKEENPPKLSFTMCNSKETISNMANPDIVQPDPFDLRSLSDEMKRESTENPVLESAKMSSTAAVSEACSSSIIAIEPDEICIPSISASLVPFFHGSQKIELLHKGVSFQLCCPSLKVRFGINTKFVDHAGWPRLSFVVDPSPNLCKVLDACDSVAQRLSLDSGSTSDWRSVVTRKNGFCNYPTVRLHIPTTVCGDMAIYATEIYERESSGNVQRLRFSKFDAAELCSLFMPGTIVDAFISLDPYDYQQNAGIKLVAKKLLIHSKQKED 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0871 500 Gene3D - 4 180 IPR036397 GO:0003676
Glsi02g0871 500 CDD DEDDh 11 175 - -
Glsi02g0871 500 MobiDBLite consensus disorder prediction 198 244 - -
Glsi02g0871 500 PANTHER DNA POLYMERASE III SUBUNIT EPSILON 5 485 - -
Glsi02g0871 500 SMART exoiiiendus 9 183 IPR013520 -
Glsi02g0871 500 FunFam Exonuclease family protein 3 181 - -
Glsi02g0871 500 SUPERFAMILY Ribonuclease H-like 9 179 IPR012337 -
Glsi02g0871 500 Pfam Exonuclease 11 174 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0871 Glsi-ChrGlsi02 5574105 5577378 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0871 02 5574105 5577378 Glsi02g0871 02 5574105 5577378 ECH