Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0801 ATGACGGCCCCGTTTCAGCAGCCGAGCACCATCAGAAAAGCTGTTGTTGAAGTAGTGAATGCACGTAATCTTCTTCCCAAGGATGGCCAGGGAAGCTCCAGCCCTTACGTCATCGCAGCCTTCGATGGACAGAGGAAGAGGACCATGACCAGGTTCAAGGAGTTGAACCCCGTTTGGAATGAGGCTCTTGAGTTCATAGTGTCTGACCCCGATGACATGGACTTCGAAGTGCTGGAGATCGAGGTCTACAACGACAAGAAGTTTGGAAATGGAAGTGGCCGTAAGAATCACTTCCTGGGCAAAGTTAAGCTGTATGGCACCCAGTTCGCCAGGAGAGGGGAGGAGAGTTTGGTCTACTTTACGTTGGAGAGGAAGAGCGTGTTTAGCTGGGTTAGAGGTGAAATTGGCCTTAAGATTTATTACTACGATGAGTTCATTGAGGAGGAAGAGAAACCGCCTCAGCACCCGGAGGAGGCACCGCAGCAACTTATAGAGCAAGAGAGGACGAAATCTCCGGCCATTGAAGTAGTTGAGCAAGTAAGGGTTCTCGAGGTTCCTGGGCCAGTGGAGCATTGTGTACCCGAAGGGCGCCCTCGTTCACCCCATGTTGTACTTTTTGAAGAATCATCCCCACCGGCGGTCCATGTACCTCAGGATCAACCATTGCCCGATATGGCAGGACGGCTTGCGTCAGAAATATATCACCCTCCAGACGTCAAAAAAATGCAGGCAGGAAGAATACCAGGAGGGGAGAGAGTCAGAATTTTGAAGAGGCCCAACGGAGATTACGCTCCTCGAGTTATCTCCAGAAGGCCCGCCGGCACCGTACCTGAGAGGGTTCCTCCTTATGATCTGGTGGAGCCAATGCAGTACCTATTTGTTAGGATAGAGAAGGCTCGTGGGCTTGCTCCGAATGAGAGTCCCTATGTGAAGATTCGAACGTCCAGCCACTTTGTAAGATCAAAACCTGCATGTTACCGTCCCAATGAGCTCCATAACTCGCCAGAGTGGAACCAGGTGTTCGCGCTGGGACACAATAAGGCCGATACTGCGAACGCGACTTTGGAGATTTCGGTTTGGGATTCCCCAACAGAGCAGTTTCTAGGCGGGGTTTGCTTTGATCTTTCTGACGTGCCCGTACGAGGCCCTCCTGACAGTCCCTTGGCGTCACAATGGTACCACCTAGAAGGCAATGCCGCCCATCAAAGCTCCAGCAGGGTTTCCGGGGATATTCAGATTTCTGTCTGGATTGGAACACAATCCGATTGTGCATTCCCTGAGGCGTGGAGCTCCGACGCACCCTACGTGGCTCACACTCGCTCGAAAGTGTACCAATCGCCGAAGCTTTGGTACTTGCGTGTGACCATAATCGAAGCTAATGACCTCAACGTCACTCCGAATCTACATCCATTGACGTCGCCGGAGATTCGAATAAAGGTGCAGTTGGGTTTTCAGTCAGCTCGAACCCAGCGAGGGTCCATGAACCCCCATGGCTTATCATTCCACTGGAACGAAGAGCTCTTTTTCGTGGCGGGCGAACCTCTGGAAGATACCGTGATCCTGCTCGTGGAAGATCGGAGCAAGGAAGCTGCACCATTGGGACACATCGTCATCCCGCTGAACTCCATCGAGCGGCGCATCGACGATCGCCACGTGGCATCCAAATGGTTCGCCTTAGAGGGTGGGTCCTACTGTGGGCGAGTCCATCTACGGCTGTGCTTGGAGGGTGGGTACCACGTGCTAGACGAAGCGGCGCACGTGTGCAGTGACTTTCGGCCGACGGCTAAGCAGCTTTGGAAGCCGGCTGTAGGGGTTCTTGAGCTGGGCATCCTTGGGGCTCGTTCTCTTCTTCCCATGAAAACCAAAGGTGCAGGAAAGGGGTCCACCGATGCTTACTGTGTGGCCAAGTACGGGAAGAAGTGGGTCCGAACTCGAACCATCACGGACAGCTTTGATCCACGTTGGAACGAGCAGTACACGTGGCAAGTATACGATCCCTGCACTGTTTTGACTATAGGGGTGTTTGACAACTGGCGCATGTTTGCTGACGTGTCAGAAGAGAAGCTCGATAGTCGCATTGGCAAAATACGAATACGAGTCTCTACGCTGGAAAGTAACAAGATATATACGAATTCGTATCCTTTGCTGGTGTTATTGAGAACCGGGTTGAAGAAAATGGGTGAGATTGAGTTGGCAGTTCGGTTCGTTTGCCCATCATTGTTGCCGAATACTTGTTCGATTTATGGGCAGCCCTTGCTTCCCAGAATGCACTATCTCCGCCCACTTGGGGTGGCCCAGCAGGAGGCCCTGCGTGGAGCCGCCACGAAGATGGTGGCCCAGTGGCTGGCACGGTCAGAGCCACCATTGGGACACGAGGTGGTTCAGTACATGCTGGATGCGGATTCGCACACTTGGAGCATGAGGAAGAGTAAGGCTAATTGGTTTCGGATCGTGGGGGTTTTGGCATGGGCTGTCGGGCTGGCAAAATGGTTGGACAAAATCAAAAGGTGGAGAAACCCAGTTACAACGATGCTTGTCCATATTTTATACCTGGTACTTGTTTGGTACCCGGATTTGATTATCCCTACGGGGTTTTTATATGTGATTTTAATTGGAATATGGTATTACCGGTTTAAGCCCAGGATTCCAGCAGGGATGGATACCCGATTGTCACAGGCTGAAACGGTTGACCCAGATGAGATGGATGAGGAGTTTGACACAATGCCAAGTTCAAAGCCACCAGATATAATCCGGATCCGGTATGATCGGTTACGGATGCTGGCAGCCCGTGTCCAAACAGTGTTAGGTGATTTTGCAACCCAAGGAGAAAGGGTGCAAGCCTTGGTGAGCTGGAGGGACCCAAGGGCCACCAAGTTGTTCATAGGAGTATGCTTGGCGATCACAATGATAATGTTCGTTGTGCCACCAAAAATGGTAGCAGTGGCTCTAGGATTCTACTACCTTCGGCATCCCATGTTCCGGGACCCAATGCCACCAGCAAGCTTGAACTTTTTCCGGCGACTTCCAAGCTTGTCTGATCGGTTAATGTAG 3051 0.5192 MTAPFQQPSTIRKAVVEVVNARNLLPKDGQGSSSPYVIAAFDGQRKRTMTRFKELNPVWNEALEFIVSDPDDMDFEVLEIEVYNDKKFGNGSGRKNHFLGKVKLYGTQFARRGEESLVYFTLERKSVFSWVRGEIGLKIYYYDEFIEEEEKPPQHPEEAPQQLIEQERTKSPAIEVVEQVRVLEVPGPVEHCVPEGRPRSPHVVLFEESSPPAVHVPQDQPLPDMAGRLASEIYHPPDVKKMQAGRIPGGERVRILKRPNGDYAPRVISRRPAGTVPERVPPYDLVEPMQYLFVRIEKARGLAPNESPYVKIRTSSHFVRSKPACYRPNELHNSPEWNQVFALGHNKADTANATLEISVWDSPTEQFLGGVCFDLSDVPVRGPPDSPLASQWYHLEGNAAHQSSSRVSGDIQISVWIGTQSDCAFPEAWSSDAPYVAHTRSKVYQSPKLWYLRVTIIEANDLNVTPNLHPLTSPEIRIKVQLGFQSARTQRGSMNPHGLSFHWNEELFFVAGEPLEDTVILLVEDRSKEAAPLGHIVIPLNSIERRIDDRHVASKWFALEGGSYCGRVHLRLCLEGGYHVLDEAAHVCSDFRPTAKQLWKPAVGVLELGILGARSLLPMKTKGAGKGSTDAYCVAKYGKKWVRTRTITDSFDPRWNEQYTWQVYDPCTVLTIGVFDNWRMFADVSEEKLDSRIGKIRIRVSTLESNKIYTNSYPLLVLLRTGLKKMGEIELAVRFVCPSLLPNTCSIYGQPLLPRMHYLRPLGVAQQEALRGAATKMVAQWLARSEPPLGHEVVQYMLDADSHTWSMRKSKANWFRIVGVLAWAVGLAKWLDKIKRWRNPVTTMLVHILYLVLVWYPDLIIPTGFLYVILIGIWYYRFKPRIPAGMDTRLSQAETVDPDEMDEEFDTMPSSKPPDIIRIRYDRLRMLAARVQTVLGDFATQGERVQALVSWRDPRATKLFIGVCLAITMIMFVVPPKMVAVALGFYYLRHPMFRDPMPPASLNFFRRLPSLSDRLM 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0801 1016 SMART C2_3c 605 712 IPR000008 -
Glsi02g0801 1016 SMART C2_3c 13 118 IPR000008 -
Glsi02g0801 1016 SMART C2_3c 291 387 IPR000008 -
Glsi02g0801 1016 SMART C2_3c 451 552 IPR000008 -
Glsi02g0801 1016 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 291 435 IPR035892 -
Glsi02g0801 1016 FunFam C2 domain-containing protein 587 739 - -
Glsi02g0801 1016 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 15 156 IPR035892 -
Glsi02g0801 1016 Gene3D C2 domain 588 737 IPR035892 -
Glsi02g0801 1016 CDD C2A_MCTP_PRT_plant 13 143 - -
Glsi02g0801 1016 CDD C2C_MCTP_PRT_plant 451 593 IPR047258 -
Glsi02g0801 1016 Pfam C2 domain 605 715 IPR000008 -
Glsi02g0801 1016 Pfam C2 domain 291 394 IPR000008 -
Glsi02g0801 1016 Pfam C2 domain 15 106 IPR000008 -
Glsi02g0801 1016 Pfam C2 domain 450 559 IPR000008 -
Glsi02g0801 1016 Gene3D C2 domain 435 576 IPR035892 -
Glsi02g0801 1016 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 15 1016 IPR047259 -
Glsi02g0801 1016 CDD C2D_MCTP_PRT_plant 605 732 IPR047255 -
Glsi02g0801 1016 CDD C2B_MCTP_PRT_plant 291 419 IPR047257 -
Glsi02g0801 1016 ProSiteProfiles C2 domain profile. 272 393 IPR000008 -
Glsi02g0801 1016 Gene3D C2 domain 10 174 IPR035892 -
Glsi02g0801 1016 Gene3D C2 domain 287 429 IPR035892 -
Glsi02g0801 1016 ProSiteProfiles C2 domain profile. 430 557 IPR000008 -
Glsi02g0801 1016 Pfam Plant phosphoribosyltransferase C-terminal 862 1016 IPR013583 -
Glsi02g0801 1016 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 450 595 IPR035892 -
Glsi02g0801 1016 ProSiteProfiles C2 domain profile. 1 119 IPR000008 -
Glsi02g0801 1016 ProSiteProfiles C2 domain profile. 587 713 IPR000008 -
Glsi02g0801 1016 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 604 756 IPR035892 -
Glsi02g0801 1016 FunFam C2 domain-containing protein 276 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0801 Glsi-ChrGlsi02 5177127 5180177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0801 2 1016 Lipid Metabolism Gene Families AT1G74720 69.131 0.0 1508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0801 02 5177127 5180177 Glsi02g0801 02 5177127 5180177 ECH