Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0761 ATGGTTTCTGATTCAATTACCACCGCTCCTATCCCTTCAGCCGCGAACACCAAGAGTTTGGGCAAGAAAAAGAGGACCAACAGGTCCGCTAAATTGAAGCAGTGTAAGATTGATGCCCGTCGCGAGCAGTGGCTTTCTCAAGTTGCGGTCAAGAATAATGGATGCAAGGATGGAGGGCACGATGGCCACGCGCCATCGGTGCCTGTTGGTAAAGACAGCAAACGTTCGTGGGAGAAATTGGAGACGAGACCTAGAGGCGAAGAGAATGACGGATCGATTCATCAAGATAGCGACTTGGAATCTCCGTCCAACAGTCCCTCTAGTGTCGATAGTAGCGTCTTGGGCGGTAATGATTCTGGAACAAATTTCACTGGGAGTAGCAGCAGTAGCAGTAGCAGTAGCAGTGCCGGTTGCTGCTCTGGGAATATCACGGAAGAAGAAGAAGAAGGTGATGATGATTGCTTGGATGATTGGGAGGCTGTGGCTGATGCTTTAGCCGCCGATGACAAGTATCAAAACCCCTGTTCGGAGTTGCCCCCTGCACACGAACCTAATGTGCAAGTGGTTTCGCCTTGTGAAATGACTCCTAGGTCGATTCTAGGAACGCGGAATTCTAAAATCGAGAATGCTGGACTAGTTCCGTGGGCCTCTGGCAATAGCCGAGCTTGGAGGTCTGATGATGCTTCTCGTCCTCAGAGTCTGCCCAATCTGTCTAAGCAGCAGAGTTTACCAAATCCCGACCGGCGCTGTGGAGGAGGGACCCCGTGGGCTTGCCCTGCAGCGCCGCCATCCTCGTGTCCAATTTGCTGCGAGGATCTCGATTTGACAGACTCTAGTTTTTTACCCTGCTTGTGTGGATTCCGGCTTTGCCTTTTTTGTCACAAGAGGATTCTTGAGGAGGACGGCCGTTGTCCTGGGTGCAGGAAGCCGTACGAGTGTGAACCTATTGAGACAGAGGCAAGCGTCCATGGAGGCAGCCTGACTCTCCGTTTGGCCCGCCCTTGTAGCCTGATTTAA 1017 0.5211 MVSDSITTAPIPSAANTKSLGKKKRTNRSAKLKQCKIDARREQWLSQVAVKNNGCKDGGHDGHAPSVPVGKDSKRSWEKLETRPRGEENDGSIHQDSDLESPSNSPSSVDSSVLGGNDSGTNFTGSSSSSSSSSSAGCCSGNITEEEEEGDDDCLDDWEAVADALAADDKYQNPCSELPPAHEPNVQVVSPCEMTPRSILGTRNSKIENAGLVPWASGNSRAWRSDDASRPQSLPNLSKQQSLPNPDRRCGGGTPWACPAAPPSSCPICCEDLDLTDSSFLPCLCGFRLCLFCHKRILEEDGRCPGCRKPYECEPIETEASVHGGSLTLRLARPCSLI 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0761 338 MobiDBLite consensus disorder prediction 96 141 - -
Glsi02g0761 338 MobiDBLite consensus disorder prediction 1 15 - -
Glsi02g0761 338 MobiDBLite consensus disorder prediction 72 95 - -
Glsi02g0761 338 SUPERFAMILY RING/U-box 263 317 - -
Glsi02g0761 338 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 263 333 IPR039780 GO:0004842|GO:0030014
Glsi02g0761 338 ProSiteProfiles Zinc finger RING-type profile. 266 308 IPR001841 -
Glsi02g0761 338 FunFam RING/U-box superfamily protein 259 324 - -
Glsi02g0761 338 MobiDBLite consensus disorder prediction 218 248 - -
Glsi02g0761 338 MobiDBLite consensus disorder prediction 222 247 - -
Glsi02g0761 338 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 261 323 IPR013083 -
Glsi02g0761 338 MobiDBLite consensus disorder prediction 1 153 - -
Glsi02g0761 338 Pfam RING/Ubox like zinc-binding domain 266 312 - -
Glsi02g0761 338 CDD mRING-HC-C4C4_CNOT4 265 309 IPR039515 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0761 Glsi-ChrGlsi02 4941689 4942929 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0761 02 4941689 4942929 Glsi02g0761 02 4941689 4942929 ECH