Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0743 ATGTTTCCTCGGAATTATTTGACTTGGGTTATGCTATGCCTCCTGGTACTTTCGACCTTCTTCGACCCATCCATGTCCGACCCACAAACCCATTGGGCTGCCAAGAAAAAGCGCATGAGAGAGAAAGTTCGCAAGATGTTTTACCATGCGTATGATAACTACATGACTCATGCATTTCCGCATGATGAGCTAAAGCCTCTAACCAAGACTTTCACGAACTCCCTAAGTGAGCTGGGAAATTTGAAGCTTGAACACTTGCCTCAAGACTACAATGGGTCAGCCCTTACACTTATTGAATCATTGTCTAGCCTTGTTATTCTGGGTAACAACACAGAATTCAATAGGGCAGTGCTTTGGCTTTCTGAAAATCTAACATTTGATGTTGATGCTCGCATAAATCTTTTTGAGTGCAACATAAGAGTACTTGGAGGACTGGTCTCTGCTCATCTTCTTGCATCTGGTTCAAACAAGTTGTTTCAAGGAGCTTACAAAAATCAGCTGCTAACTCTGGCTGAAGATTTAGGAAACCGCTTTCTACCAGCATTTAATACACCTACTGGATTACCATATGCATGGATCAATTTAAAGTATGGAGTAATGGAGAATGAGACTACAGAAACAAGCACTTCAGGGTGTGGTTCTCTAATTCTTGAAATGGGTGCTTTATCAAAATTAACTGGTGACCCCAGATATGAATCAGTAGCTTTACGTGCTCTACGTAAGCTATGGAACATGCGGAGTTCATTAAATTTAGTTGGAACTACACTGGATGTGGCAACTGGGGAATGGATTGAGTTCTCAGCAGGAATTGGAGCTGGGGTTGATTCATTCTATGAGTATCTACTTAAAGCCCATATCCTTTTTGGGAAGGAGGACTTTTGGAGAATGTTTCATTCTTCATATCTTGCTGTGCAAAAATATTTCAGACATGGTCCATGGTACCATGAAGCTGATATGAGGACAGGAAGAGCAACTTATTGGCAACTTACGAGCCTTCAAGCATTTTGGCCTGGCCTACAGGTTCTTATTGGGGATATTGCAGCTGCTAATTCATCACACCGTGAGTTCTTCCACATCTGGAAGAGATTTGGAGTGCTACCGGAGAGGTATTTGCTGGACCATCAGATGCTGCATCCTACTGAAAAATATTATCCATTGCGCCCTGAATTTGCAGAGTCAACATTCTATTTATATCAAGCAACTAAAGATCCATGGTATATTGAAGTGGGTGAATCGATAATTAATTCCCTTAATTCATACACCAAAGTGGAAGGTGGGTTTGCGAGCATCAAGGATGTGACGACTATGCAGTTGGAAGATCATCAACATAGTTTTTTCCTCGCTGAAACGTGCAAATATTTATATCTTCTGTTTGATGATTCATTTTTGCATGATGGTAATTACATATTTACCACCGAAGGTCACCCCCTTCAAGTCCTAAGCGCTTGGCATGAAAGGCTTCCAGAAACTTATATTCCTACTAATTGGACTTTCATGAAGAGTCAAGAAGAAGCATATAGAATCAGTGCTATGTCATTGCAAGTATGTCCCGCTACGACTCTAAACTCAGGCCAACATATTGAGAGTGCATGCCATGTTCTCGATGCTCGCACTGACCACAGGTGTTTGGCTGATGAAGATTGTGGTATTGATTCAACAACATGCAGGAGGAGGTCTTGTAGCATGGCTGGTTATTGTGGGTTATGGCTCTTCATTTGA 1719 0.4159 MFPRNYLTWVMLCLLVLSTFFDPSMSDPQTHWAAKKKRMREKVRKMFYHAYDNYMTHAFPHDELKPLTKTFTNSLSELGNLKLEHLPQDYNGSALTLIESLSSLVILGNNTEFNRAVLWLSENLTFDVDARINLFECNIRVLGGLVSAHLLASGSNKLFQGAYKNQLLTLAEDLGNRFLPAFNTPTGLPYAWINLKYGVMENETTETSTSGCGSLILEMGALSKLTGDPRYESVALRALRKLWNMRSSLNLVGTTLDVATGEWIEFSAGIGAGVDSFYEYLLKAHILFGKEDFWRMFHSSYLAVQKYFRHGPWYHEADMRTGRATYWQLTSLQAFWPGLQVLIGDIAAANSSHREFFHIWKRFGVLPERYLLDHQMLHPTEKYYPLRPEFAESTFYLYQATKDPWYIEVGESIINSLNSYTKVEGGFASIKDVTTMQLEDHQHSFFLAETCKYLYLLFDDSFLHDGNYIFTTEGHPLQVLSAWHERLPETYIPTNWTFMKSQEEAYRISAMSLQVCPATTLNSGQHIESACHVLDARTDHRCLADEDCGIDSTTCRRRSCSMAGYCGLWLFI 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0743 572 Gene3D - 29 489 IPR012341 GO:0005975
Glsi02g0743 572 SUPERFAMILY Seven-hairpin glycosidases 37 492 IPR036026 GO:0004571|GO:0005509|GO:0016020
Glsi02g0743 572 PRINTS Glycosyl hydrolase family 47 signature 385 409 IPR001382 GO:0004571|GO:0005509|GO:0016020
Glsi02g0743 572 PRINTS Glycosyl hydrolase family 47 signature 131 149 IPR001382 GO:0004571|GO:0005509|GO:0016020
Glsi02g0743 572 PRINTS Glycosyl hydrolase family 47 signature 444 464 IPR001382 GO:0004571|GO:0005509|GO:0016020
Glsi02g0743 572 PRINTS Glycosyl hydrolase family 47 signature 271 288 IPR001382 GO:0004571|GO:0005509|GO:0016020
Glsi02g0743 572 PRINTS Glycosyl hydrolase family 47 signature 180 199 IPR001382 GO:0004571|GO:0005509|GO:0016020
Glsi02g0743 572 PRINTS Glycosyl hydrolase family 47 signature 328 344 IPR001382 GO:0004571|GO:0005509|GO:0016020
Glsi02g0743 572 PRINTS Glycosyl hydrolase family 47 signature 46 66 IPR001382 GO:0004571|GO:0005509|GO:0016020
Glsi02g0743 572 Pfam Glycosyl hydrolase family 47 46 478 IPR001382 GO:0004571|GO:0005509|GO:0016020
Glsi02g0743 572 PANTHER ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2 10 503 IPR044674 GO:0004571|GO:1904380|GO:1904382
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0743 Glsi-ChrGlsi02 4838876 4844113 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0743 10 569 Glycoside Hydrolase AT1G27520 77.562 0.0 927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0743 02 4838876 4844113 Glsi02g0743 02 4838876 4844113 ECH