Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0729 ATGGGGGAAAACAAACGAAAGAGAGGACGCAAACCCAAAAATCCGGCCGCCGAAACCCTAGACTTCCCCACCACTAGTAGCGCCCCTAACGACAACAACCCATCTACAATGGATGAGGTCTTCTCCGTCGGCAACGTCGAACTAATCGATACCACCGCCTCTCCACACCACCGTCGCCACCGTGGCCGACCCAAGAACTCGTCCAAACACTCCGACAAGCCACTTGGTATTTCTACGGCTAGACGGGTCGCCCGTCCCCTCGACAATGGCGGCGATTTTACGGTTCCCGGTGATGTAGGGGGTTCATCGGCAATGGCGTTGGCCATGGAAGTGGACCCGGCGTGGGAGAGCGTTTCGGCGAGGGTCGTGCCGTCGATGGACTCCGTTGTTAAGGTGTTCTGCGTGCACACAGAACCTAATTTCTCGCTACCGTGGCAGAGGAAAAGACAGTATAGCTCCAGCAGTAGTGGGTTTGTGATTACTGGGAGGAGGGTGCTCACCAATGCCCATTCAGTGGAGCACTACACCCAAGTCAAGCTCAAGAAACGCGGTTCTGATACCAAATTCTTGGCCAAGGTTCTTGCCATTGGGACCGAGTGTGACATTGCCATGCTTACTGTTGATGATGATGAATTCTGGAAAGGGATGTCACCTGTAGAGTTTGGGGATTTGCCCACGCTTCAAGATGCGGTTACTGTTGTGGGCTACCCAATTGGTGGAGACACTATTTCGGTGACAAGTGGTGTCATATCTCGCATTGAGATTCTATCATATGTCCATGGTTCCACCGAACTTCTAGGTTTACAGATCGATGCTGCTATAAACTCTGGCAATTCCGGTGGGCCTGCATTTAATGATAAAGGAAATTGTGTGGGAATTGCATTTCAGTCCCTCAAGCATGAAGATGTGGAGAATATAGGTTATGTCATTCCAACACCAGTTATAATGCATTTCATCCATGATTATGAGAAGAATGGAGCATATACAGGATTCCCTACCCTTGGGTTGGAGTGGCAGAAAATGGAAAATCCTGATCTGCGAACGGCAATGGGCATGAAACCTGATCAGAAGGGTGTGCGTATTAGAAGAATTGATCCAACTGCTCCAGAATCTAACGTTTTGAAACCATCAGATGTTGTCCTTAGCTTTGATGGGGTTGATATTGCCAATGATGGGACGGTTCCATTTCGCCATGGAGAACGCATTGGTTTCAGTTATCTTATATCCCAGAAATACACTGGGGATAATTCAGTAATCAAAGTATTACGAAATTCAGAGATTTACAAATTTGACATTAAACTTGGTAGTCACAAAAGGCTCATTCCAGCACACAGCAAGGGCAGGCCTCCCTCATATTATATCATTGCAGGATTTGTTTTTACTACGGTGTCAGTTCCATATCTTCGTTCTGAGTATGGAAAGGATTATGCGTATGAAGCTCCTGTGAAGCTTTTGGATAAACTGCTGCATTCAATGCCACAATCACCAGATGAACAACTTGTTGTGGTCTCTCAGGTGCTGGTAGCTGATATAAATATTGGGTATGAAGATATTGTTAACACACGGGTCCTTGCTTTCAATGGTGAACCTGTTAAAAATCTGAAGAGCTTGGCCAGCATGGTAGAGAGCTGCGATGACGAATATCTAAAATTCAATCTAGATTACGAGCAGATAGTGGTCCTTCGCACTATGACAGCGAAAGCAACGACTCTTGATATTCTTGCAACACACTGCATTCCGTCAGCAATGTCTGATGATCTCAAGAATAGATCCCCAATGGGAGTTCCCTTGGAAGCCATGATTAATGCTCCTGACATAGACGTTCCATATCTAATGCAGCCAGCTAGTGACCATCATCGAACCCGGTTGTGTATGGAGAAGATGGGTACTGATGATCCCCGTTTGGAAGAATTTTTTGAAGAGAAGAAGCGCGTCAGGAACCCTCTGGTCCCCGTTGGTGCCCTTATTACTGCTGGCGTGCTAACGGCTGGCTTAATCAGTTTTAGACAAGGCAATTCTCACTTGGGCCAGAAGTTAATGAGGGCTCGTGTGGTTGTCCAAGGTGCTACGGTGGCGCTCATGGTTGGCACTGCATACTATTATGGAGATAATCCTTGGCGGTCGAGTTAA 2130 0.4709 MGENKRKRGRKPKNPAAETLDFPTTSSAPNDNNPSTMDEVFSVGNVELIDTTASPHHRRHRGRPKNSSKHSDKPLGISTARRVARPLDNGGDFTVPGDVGGSSAMALAMEVDPAWESVSARVVPSMDSVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVITGRRVLTNAHSVEHYTQVKLKKRGSDTKFLAKVLAIGTECDIAMLTVDDDEFWKGMSPVEFGDLPTLQDAVTVVGYPIGGDTISVTSGVISRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGNCVGIAFQSLKHEDVENIGYVIPTPVIMHFIHDYEKNGAYTGFPTLGLEWQKMENPDLRTAMGMKPDQKGVRIRRIDPTAPESNVLKPSDVVLSFDGVDIANDGTVPFRHGERIGFSYLISQKYTGDNSVIKVLRNSEIYKFDIKLGSHKRLIPAHSKGRPPSYYIIAGFVFTTVSVPYLRSEYGKDYAYEAPVKLLDKLLHSMPQSPDEQLVVVSQVLVADINIGYEDIVNTRVLAFNGEPVKNLKSLASMVESCDDEYLKFNLDYEQIVVLRTMTAKATTLDILATHCIPSAMSDDLKNRSPMGVPLEAMINAPDIDVPYLMQPASDHHRTRLCMEKMGTDDPRLEEFFEEKKRVRNPLVPVGALITAGVLTAGLISFRQGNSHLGQKLMRARVVVQGATVALMVGTAYYYGDNPWRSS 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0729 709 PANTHER - 50 588 - -
Glsi02g0729 709 FunFam protease Do-like 9 214 324 - -
Glsi02g0729 709 Pfam Trypsin-like peptidase domain 156 293 - -
Glsi02g0729 709 CDD PDZ_serine_protease 332 432 - -
Glsi02g0729 709 Pfam PDZ domain 441 586 IPR041517 -
Glsi02g0729 709 Gene3D - 440 591 IPR046449 -
Glsi02g0729 709 FunFam Protease Do-like 9 106 212 - -
Glsi02g0729 709 ProSiteProfiles HIG1 domain profile. 619 709 IPR007667 -
Glsi02g0729 709 Gene3D - 331 439 IPR036034 GO:0005515
Glsi02g0729 709 MobiDBLite consensus disorder prediction 1 76 - -
Glsi02g0729 709 Gene3D - 647 706 - -
Glsi02g0729 709 SUPERFAMILY PDZ domain-like 357 439 IPR036034 GO:0005515
Glsi02g0729 709 SUPERFAMILY Trypsin-like serine proteases 126 326 IPR009003 -
Glsi02g0729 709 Gene3D - 213 324 IPR043504 -
Glsi02g0729 709 MobiDBLite consensus disorder prediction 19 40 - -
Glsi02g0729 709 PRINTS HtrA/DegQ protease family signature 373 385 IPR001940 GO:0004252|GO:0006508
Glsi02g0729 709 PRINTS HtrA/DegQ protease family signature 157 169 IPR001940 GO:0004252|GO:0006508
Glsi02g0729 709 PRINTS HtrA/DegQ protease family signature 185 205 IPR001940 GO:0004252|GO:0006508
Glsi02g0729 709 PRINTS HtrA/DegQ protease family signature 264 281 IPR001940 GO:0004252|GO:0006508
Glsi02g0729 709 PRINTS HtrA/DegQ protease family signature 227 251 IPR001940 GO:0004252|GO:0006508
Glsi02g0729 709 Gene3D - 105 212 IPR043504 -
Glsi02g0729 709 Pfam Hypoxia induced protein conserved region 647 696 IPR007667 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0729 Glsi-ChrGlsi02 4744565 4751965 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0729 02 4744565 4751965 Glsi02g0729 02 4744565 4751965 ECH