Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0678 ATGAGGAAGGAAGGGGTCGTGTGTGTGGCGGTCAACGTCATCTGTTTCGTTTTGGTATGTGGTGCAATCGAGTCCCCACAGTACACAGTGGTGCACTTGGAGTCGGATTTCGAGATCAGACTCTACAGAGACTCCGTGTGGATGTCCGCTCCTGCTCGAGACATTTCCTTCGAGAAGGCCACCTGGAATGGCTTCCACAGGTTGTTCCAGTACATACAAGGTGCTAACCTGAACTTCTCTCGAATTGCAATGACTGCTCCCGTGTTGACAAGCATTGTCCCTGGAGCTGGTCCCCTTCACTCATCGGCCTACTGTGTTAGTTTTTACTTGCCTGTGAAGTTCCAAGGTAGCCCACCACTCCCACTTCCCGAATTACATCTCAAGCCCTATAAATGGGACAGTCACTGCTTTGCTGTCAGAAAGTTCTCCGGATATGCAAGGGATGACAACATTGTAAAGGAGGCAGAAAAGCTTGCCATCAGTCTGAGCAGATCTCCATGGGCAAATGCAACATCTTCCGAGAGTCCACAAGCTTACTCAATTGCCCAATACAGTTCTCCTTTTCGGATTATTGGCCGTACAAATGAGGTTTGGGTGGAAATTGATGCACCTGATTTAGATGGTTGTGAATTCGTTGGTGTTGCTGCATATTGA 654 0.4847 MRKEGVVCVAVNVICFVLVCGAIESPQYTVVHLESDFEIRLYRDSVWMSAPARDISFEKATWNGFHRLFQYIQGANLNFSRIAMTAPVLTSIVPGAGPLHSSAYCVSFYLPVKFQGSPPLPLPELHLKPYKWDSHCFAVRKFSGYARDDNIVKEAEKLAISLSRSPWANATSSESPQAYSIAQYSSPFRIIGRTNEVWVEIDAPDLDGCEFVGVAAY 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0678 217 SUPERFAMILY Probable bacterial effector-binding domain 13 201 IPR011256 -
Glsi02g0678 217 Pfam SOUL heme-binding protein 23 200 IPR006917 -
Glsi02g0678 217 Gene3D Regulatory factor, effector binding domain 22 206 IPR011256 -
Glsi02g0678 217 FunFam Heme-binding protein 2 23 207 - -
Glsi02g0678 217 PANTHER HEME-BINDING PROTEIN-RELATED 19 205 IPR006917 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0678 Glsi-ChrGlsi02 4406296 4408302 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0678 02 4406296 4408302 Glsi02g0678 02 4406296 4408302 ECH