Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0648 ATGAATTCAATAAACCCTGCAGCCGTCATAGACCAGTCAGGCATGGCAAGCACCAATTTTCTTGCTATTCTAAAGGTGCTGATGATTTTCATATGTTCAGGCTGGGCTTCTCTTTGGCTTCTGAAGCCTACCCAACTATGGACAAGAAAATGGAAAGACGCTGAAGAAAGTGCTAGTAATACCGTGTTTGGGTACTATGGTCTTAACTATGCTGTGTATACATTTCCTATAATTGCTGTTGCTATAATAGGACTTATTTACTTGGATTTGAAATCTGGAGAGCAAAGAAGCAGAAATGCGAGGAGTCCATCCATTGTCTTCTCAAATCCACTTGTGGTGAACGGTCTTCTGGGAATCTTATCCACCATCGAAATACTGCTAGTTTTCCTTTTCTTCCTTTTCTTGGCATGGACTTTTTATGCTCGCATTTCCAATGACTTCAAAAATTTAATGCCAGACAAATCACTTAAGTTGGACTTATGGCAACTCAAGTATCTCAGAGTAGCAACCCGCTTTGGTTTGCTAGCAGAAGCCTGTCTGGCATTGCTTCTTCTGCCTGTCTTAAGGGGACTGGCCATATTTCGCATACTTGGCATTCAATTTGAAGCTTCAGTAAGATATCATACCTGGTTTGGAACAGCAATGATAGTTTTTGCTATAATCCATGGTGGAAGCACTTTGTTCATCTGGGGTGTCAGCCATCACATACAGAATGAGATGTGGAAGTGGCAGAAGACAGGACGTATATACCTTTCTGGAGAGATTACACTAACTACCGGACTAGTTATCTTGATCACAGCACTTCCGCAAATTAGAAGGAAAAAGTTTGAAATCTTCTACTACACCCACCATCTTTATACAATCTTTCTGGTATTTTTCCTGTTTCATACTGGAGATAGGCACTTTTACATGGTCTTCCCAGGAATTCTTCTTTTTGGTCTTGACAAACTGCTTCGCGTCATACAATCAAGACCAAGAACTTGCGTTGTTTCAGCTCGAGTTTTCCCTTGCAAAGCTGTGGAGCTCATTCTACCCAGAGATCGAAGGCTTAACTATACCCCTACAAGTGTTATATTTATGAAGATACCAAGCATATCAAATCTTCAATGGCACTCCTTCAGTGTGACTTCTAGTTCCAGAATTGATGAACAGATGATGTCAGTGATAGTTAAATGTGAAGGGTCGTGGACAAGTTCACTATATAACATGATACATGCTGAGCTAGACAGAGATACTGATAATGTGAAGGGTATACCTGTTGCAATCGAAGGACCTTATGGACCTGCTTCATTGGACTTCTTAAAATATGACAGTCTACTTCTGGTTGCTGGAGGGAGTGGAATAACCCCATTTCTGAGTATTTTGGCAGAAGTTGCCTCAGCCACCAACAAAAGTGGATTCCCCTCAAGGATACAGCTTGTGTATGTCATTAAGAAGGCTCAATATTTTTCTCTGTTGCATTCAATCTCCCATCTGTTGCTCAACCAATCGGCTGAAAACTGCCGTTTGAAGCTAAAACTGTTTATAACCCAAGAAAAACAATCGGGGTTGAGAATTAGAGACCTACTAAATGAGTTTTTTGAAGTAAGAACCCTGCACTTGAACACAGAGTGTTCAAATTATGCAATATATGGGCTTGAAAGCGCAACTTGGATGGCTGCCATTGCTGGATTTTGCTCCATCATTTTTCTGATTTTTCTAAGCTGGTTCAACCATACTATAATTCCATCCGGCAAGGGCTCCAAACTGTCCAAAGAAAAGAGTCCCTCTTGGGTCGTGGATTTGCTTCTTATAGCTTCTTTTGTGATAGCTTTCGTATGCAGCAGCCTGATAGCAATCTCTTTGAGGTGGAGAAGGCTGGAGAAAGGGATTCCATCAATCTCCCAGAAAGAATCTAAACCCCTGGATCTAAGTTCGACTGAAACTAGGAGTGCTCTTGAAGAACATGAAGTCCATTTTGGGGGACGACCAAACTTCCAAGATATTTTTGGCAAGTTACCAAATGAAATTGGTGGATCAAATATTGGAGTTTTGGTGTGTGGACCAGAGAGTATGAAGGAGTCAGTGGCATTCATATGCCAGCAGAAATCTAAGTGCTTCAAGTTAGGTGCAAATAGAAAGGAACCCTGCTTTACTTTCCATTCCCTCAACTTTACACTCTAG 2163 0.4119 MNSINPAAVIDQSGMASTNFLAILKVLMIFICSGWASLWLLKPTQLWTRKWKDAEESASNTVFGYYGLNYAVYTFPIIAVAIIGLIYLDLKSGEQRSRNARSPSIVFSNPLVVNGLLGILSTIEILLVFLFFLFLAWTFYARISNDFKNLMPDKSLKLDLWQLKYLRVATRFGLLAEACLALLLLPVLRGLAIFRILGIQFEASVRYHTWFGTAMIVFAIIHGGSTLFIWGVSHHIQNEMWKWQKTGRIYLSGEITLTTGLVILITALPQIRRKKFEIFYYTHHLYTIFLVFFLFHTGDRHFYMVFPGILLFGLDKLLRVIQSRPRTCVVSARVFPCKAVELILPRDRRLNYTPTSVIFMKIPSISNLQWHSFSVTSSSRIDEQMMSVIVKCEGSWTSSLYNMIHAELDRDTDNVKGIPVAIEGPYGPASLDFLKYDSLLLVAGGSGITPFLSILAEVASATNKSGFPSRIQLVYVIKKAQYFSLLHSISHLLLNQSAENCRLKLKLFITQEKQSGLRIRDLLNEFFEVRTLHLNTECSNYAIYGLESATWMAAIAGFCSIIFLIFLSWFNHTIIPSGKGSKLSKEKSPSWVVDLLLIASFVIAFVCSSLIAISLRWRRLEKGIPSISQKESKPLDLSSTETRSALEEHEVHFGGRPNFQDIFGKLPNEIGGSNIGVLVCGPESMKESVAFICQQKSKCFKLGANRKEPCFTFHSLNFTL 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0648 720 FunFam ferric reduction oxidase 8, mitochondrial 420 555 - -
Glsi02g0648 720 Gene3D - 420 551 IPR039261 -
Glsi02g0648 720 Gene3D - 604 718 IPR039261 -
Glsi02g0648 720 SFLD Ferric Reductase Domain 44 718 - -
Glsi02g0648 720 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 313 432 IPR017927 GO:0016491
Glsi02g0648 720 Pfam FAD-binding domain 330 430 IPR013112 GO:0016491
Glsi02g0648 720 CDD NOX_Duox_like_FAD_NADP 329 483 - -
Glsi02g0648 720 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 420 515 IPR039261 -
Glsi02g0648 720 SFLD Ferric reductase subgroup (FRE) 18 718 - -
Glsi02g0648 720 Pfam Ferric reductase like transmembrane component 173 293 IPR013130 -
Glsi02g0648 720 Pfam Ferric reductase NAD binding domain 436 694 IPR013121 GO:0016491
Glsi02g0648 720 PANTHER NADPH OXIDASE 46 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0648 Glsi-ChrGlsi02 4218703 4221571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0648 193 720 Miscellaneous Gene Families AT5G50160 48.825 1.04e-180 525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0648 02 4218703 4221571 Glsi02g0648 02 4218703 4221571 ECH