Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0643 ATGAGGTTGATCTCCATGAGTTCAACCCTTATGACCAAGACTCCCACCATAACATTGTTGGTCTCCTTCACTGCGTCCTGTATTGTCTATTTGCTACGTGACCGGATATTTGAAGGATGGTCGGGTTTCGATGTGGCGGCGCTGCCTCTAATTCTGGGGCTCGTTATGACTGTAGCGGGGGTGATAGTGGTGTTCCGAGCCGCCATGATTACATGGATCACAGTGCTAGTGCTGCTTACCTTCGCAGGCAATCGTCGCCGGGTTTTGGTTAAGCGAGGCAGGCTTATCACCGGTGAAGTCACCTGTGTTAGGGTTTTGAGTTCCGCCTCTTCGTCACCTTTCTGGCCTCAAGCTATGGGCTCTACTCTAGTGATCAAGGTCAAATATGGAGATAGCCTCAGGCGCTTTAATGTTTGTGTTGATGAAAATGACCAACTGAACCTTGATGTTGCTGGTTTAAGGGCTAAGATACTTTCACTTTTTACTTTCCCCTCTGAATCCAATTTCACGCTGAGATATGTTGATGAAGATGGTGACTTGGTGACAATAGTGAATGATGATGATTTGCAAGAAGTGATGAGGCAGAAAATAAAGTTCTTGAGAATTTATGTACATATTAGCAATGAAAACGGTGTTAAATCAAGTGCTAGTTCTCTGGGAAATGCCACCCCCTTTGGATCTCCTCCGGCCAAGAATCTAAGTACGAGTGGCAATCCTATTGTTACTGATGTATTGAAGTCTTTGCGAGAACCATTACATGAGGCTCTTTCCAATCTATCACTTGACTTGGCTTCAAAAGCTGCATCTTTTAGTCCAGTGCTTGCTACTCTTGCTGATTATATATCCAAAATGGGACAATCCTTGCTAAATTCTGATTGCAAGCATAAAGTTGCAGCTCATCAGAGCTCGAAAAATGGTGTTCTTGAGTATCCTGCCGTAATGACTATAATTCCTGAAGAAAGAGTTCCACAATCTCCATGTGTGGTCTCAACTTCTAATGCCAATCAACATGTGGAGGATGAAAATGTAACTAAGGATGTAGCAGCACCAATTGCCCCAGTTGATCTCAATCTTCCATGTGATCCCAGTCCATCTCAATTCTCAAATGTGAATACTGCACCAGTTTCATCTGCAGCGCCAGATGGTGATGGAAAAGAAGGGAAAATGGATACTAATGTTGAGGGTGGTATTTTTTCCGTATCCACTTGTGATGCAGCTGTTGATAACAGCTCAACCCTGGTTACTGCAATGGGTTATAGTCCTTTTGTTGAACGTCCTTATTCTGGGACATATCTTATTGATTCAACAGCACAGTCTCTTAGAAATCACTGCATTCATCCATTGAAAAGGAGCTACAGTCACAATGAGGCCATAAGTGGAAACAAAACTACAACCTTTGCAGCATCTGCTTCAATAGATTGGCCGCCTTGCATCAGTTCTCCAACATTACCGCAATTTTTTCGAAAAGGCGTTACTTTGAAGCAAGTGAGGCCCAAGCTAGATAGCCAGTTCATTTTCGATGTCAATGTAATAGATGGTACGTTGATGGCCCCATCTACACCCTTTACAAAGATTTGGCGGATGTGCAACAATGGAACTATAGTGTGGCCCAAGGGAACTCAACTTGTATGGATTGGTGGAGACAAATTTAGTGACTTTCATTCAGTGAACTTGGAGATTTCTGCATATGGTGTACCTGTGGAAAAGGAAATTGACATTGCAGTTGACTTTAGAGCACCTCAGTTGCCTGGTCAATACATTTCATACTGGAGGTTGGCATCCCCAACTGGTCAAAAATTTGGTCAACGCGTTTGGGTTCTTATTCAGGTTGATGCGTGTTTTAAGCCTTCATTTTATGATAGCTCTGAAGATGTCAACTTGAATATTCCCCTTGATGGCAGTGGTTCTAAAGTACCTGGGGTTATAGATAACAATGTTCAACCTCTTTTGAATAACGCTTTTCTTCAATCCTGCAATTCTAATGCTTCCACTGAACCTGAGAAGCAAATGGTTAATGTGCAACCCGGGCAAGAGCTGGAAAATAACTTCCCTATAAATGAGACCACATTCATTGGCCATGGTGCCTTTCCCCCTAAAACTTCTGTGGCGTCTACATCTGCTTTTGGCGACGGCAAAATGAATAAGAGGCTGCTGATGAAAAACAATGGAAACATCAAAGATGTTGGAATGGATTTACTTAAACACTCTGCAGAGCATATCCTGTATAGTTCTCTGTTTCATGTCAGCAAATCCAGTTGCTATGCAAATCAGACTTCCAATGGTTTCCCACTAGGGTTCTGGCTGCTGGAGTCTTCTGGGTCATGA 2325 0.4297 MRLISMSSTLMTKTPTITLLVSFTASCIVYLLRDRIFEGWSGFDVAALPLILGLVMTVAGVIVVFRAAMITWITVLVLLTFAGNRRRVLVKRGRLITGEVTCVRVLSSASSSPFWPQAMGSTLVIKVKYGDSLRRFNVCVDENDQLNLDVAGLRAKILSLFTFPSESNFTLRYVDEDGDLVTIVNDDDLQEVMRQKIKFLRIYVHISNENGVKSSASSLGNATPFGSPPAKNLSTSGNPIVTDVLKSLREPLHEALSNLSLDLASKAASFSPVLATLADYISKMGQSLLNSDCKHKVAAHQSSKNGVLEYPAVMTIIPEERVPQSPCVVSTSNANQHVEDENVTKDVAAPIAPVDLNLPCDPSPSQFSNVNTAPVSSAAPDGDGKEGKMDTNVEGGIFSVSTCDAAVDNSSTLVTAMGYSPFVERPYSGTYLIDSTAQSLRNHCIHPLKRSYSHNEAISGNKTTTFAASASIDWPPCISSPTLPQFFRKGVTLKQVRPKLDSQFIFDVNVIDGTLMAPSTPFTKIWRMCNNGTIVWPKGTQLVWIGGDKFSDFHSVNLEISAYGVPVEKEIDIAVDFRAPQLPGQYISYWRLASPTGQKFGQRVWVLIQVDACFKPSFYDSSEDVNLNIPLDGSGSKVPGVIDNNVQPLLNNAFLQSCNSNASTEPEKQMVNVQPGQELENNFPINETTFIGHGAFPPKTSVASTSAFGDGKMNKRLLMKNNGNIKDVGMDLLKHSAEHILYSSLFHVSKSSCYANQTSNGFPLGFWLLESSGS 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0643 774 MobiDBLite consensus disorder prediction 363 388 - -
Glsi02g0643 774 ProSiteProfiles PB1 domain profile. 122 207 IPR000270 GO:0005515
Glsi02g0643 774 SMART PB1_new 122 207 IPR000270 GO:0005515
Glsi02g0643 774 Pfam PB1 domain 123 205 IPR000270 GO:0005515
Glsi02g0643 774 SUPERFAMILY CAD & PB1 domains 118 205 - -
Glsi02g0643 774 CDD NBR1_like 498 611 IPR032350 -
Glsi02g0643 774 Gene3D - 118 206 - -
Glsi02g0643 774 Gene3D Immunoglobulins 494 613 IPR013783 -
Glsi02g0643 774 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Glsi02g0643 774 PANTHER OVARIAN CARCINOMA ANTIGEN CA125-RELATED 119 734 - -
Glsi02g0643 774 Pfam Ig-like domain from next to BRCA1 gene 509 610 IPR032350 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0643 Glsi-ChrGlsi02 4185056 4194456 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0643 02 4185056 4194456 Glsi02g0643 02 4185056 4194456 ECH