Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0588 ATGGAAACTCCCCCCTCGTCACTGAAGTTGGAAGCCCCACTGCAGGGGAACGAAAGAAGACTCGGAAGCGCAACTGAGTACAAATCGGCCATGGAAGGACAAGAAGGGACTCAGCAGCCACAGCTGGTGCTCGCTCACAAGCTCTTCCTTCTCAGACATGGTGATGTCCAAGACATCGAGAAGGTCCGGCTTAAAGATGAGGTTTTTACTTATGTCAAAGATAATGATATGCTTCCTTTATATGAAGCCCTAGTTGCTGATTCGGTATTGGACATGGATCAAAGCGTTTTGGACTCGATGCGTGCTAAAATAGACGAGGAGCTCAAGAAGCTTGATGAAAAGATTGCTGATGCTGAGGAAAACTTAGGTGAGAGTGAAGTTCGAGAAGCTCACTTGGCAAAATCCCTGTTCTTCATCCGAATTGGCGACAAGGAGAGAGCCTTGGAACTTCTCAAGGTAACAGAAAGCAAGACAGTTGCAGTTGGCCAGAAGATGGACCTGGTGTTTTATACATTGCAGCTTGGTTTTTTTGACATGGATTTTGATCTCATATCCAAAAGCATTGACAAAGCTAAAAGTTTGTTTGAGGAAGGTGGTGATTGGGAAAGAAAGAACCGGCTGAAAGTGTATGAAGGCCTGTACTGCATGTCAACTCGAAATTTCAAGAAGGCTGCCAATTTGTTTTTGGATTCTATTTCAACCTTTACTACTTACGAACTTTTTCCCTATGACACCTTTATATTTTACACAGTTTTGACAAGCATTATATCATTGGATAGAGTTTCCTTGAAGCAAAAGGTAGTGGATGCTCCTGAGATCTTGACAGTGATCGGCAAAATCCCATATCTTTCAGAGTTTTTAAACTCCCTATATGATTGTCAATACAAGTCATTTTTCTCTGCATTTGCTGGCCTGACGGAGCAAATTAAGTTGGACCGTTATTTGCATCCACACTTTCGATATTACATGAGGGAGGTCAGAACTGTTGTTTATTCCCAGTTTTTGGAATCTTACAAGAGTGTTACAATTGAGGCTATGGCAAAAGCATTTGGAGTGACTGTGGATTTCATTGATCTGGAGCTATCGCGTTTTATTGCAGCTGGGAAACTTCATTGTAAGATTGATAAAGTTGCAGGCGTCCTTGAAACTAACCGTCCTGATGCTAAGAATGCTCTTTACCAAGCAACTATCAAGCAAGGGGACTTCCTATTGAACCGGATCCAAAAGTTGTCACGTGTTATTGATCTTTAA 1251 0.4213 METPPSSLKLEAPLQGNERRLGSATEYKSAMEGQEGTQQPQLVLAHKLFLLRHGDVQDIEKVRLKDEVFTYVKDNDMLPLYEALVADSVLDMDQSVLDSMRAKIDEELKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKERALELLKVTESKTVAVGQKMDLVFYTLQLGFFDMDFDLISKSIDKAKSLFEEGGDWERKNRLKVYEGLYCMSTRNFKKAANLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVDFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQATIKQGDFLLNRIQKLSRVIDL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0588 416 Coils Coil 97 128 - -
Glsi02g0588 416 Pfam 26S proteasome subunit RPN7 93 266 IPR045135 -
Glsi02g0588 416 PANTHER 26S PROTESOME SUBUNIT 6 39 416 IPR019585 -
Glsi02g0588 416 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 317 400 IPR000717 -
Glsi02g0588 416 Pfam PCI domain 284 384 IPR000717 -
Glsi02g0588 416 ProSiteProfiles PCI domain profile. 220 388 IPR000717 -
Glsi02g0588 416 SUPERFAMILY "Winged helix" DNA-binding domain 312 393 IPR036390 -
Glsi02g0588 416 FunFam 26S proteasome regulatory subunit N7 41 367 - -
Glsi02g0588 416 Gene3D - 36 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0588 Glsi-ChrGlsi02 3794514 3799535 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0588 02 3794514 3799535 Glsi02g0588 02 3794514 3799535 ECH