Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0572 ATGGGCCGAAACTGCTGGCTCACAATTTCAATTTCACGGTTTCATTCGTCAATGGCACTTTACCTTCTTTACGAATCTGCTTCTGGGTATGCCCTGTGCCATGCTCGTGGCCTTGATGAAATAGGGCAGAACACCGAAGCGGTTCGGAATTCTGTTTCCGACTTGAACAGGTTCGGCAAGGTCGTGCAGCTTACAGCATTTAGTCCTTTTCAGTCCGCTCTCGATGCCCTTAAGCAGTGCAACTCGGTTTCTGAAGGCCTGTTGACTGATGAGCTGAGAACTTTTTTGGAGATTAACCTCCCTAAAGGTAAGGAAGGAAAGAAGCCAAAGTTCAGTTTAGGTGTAGCAGATCCTAAGATTGGTTCTCAGATCTCTGAAGTGACTAAAATTCCTTGCCAAAGTAATGAGTTTGTTGGTGAGCTGCTTCGTGGTGTCCGTCTTCATTTTGATAGGTTTATCAATGATCTCAAGCCTGGAGATTTGGAAAAAGCACAACTTGGTCTGGGGCATAGTTACAGCAGGGCCAAAGTGAAATTTAATGTTAATCGAGTTGACAATATGGTCATTCAAGCAATATTCCTTCTTGATACACTTGATAAGGATATTAATTCCTTTTCCATGAGAGTCAGGGAATGGTACTCATGGCATTTTCCTGAACTGGTGAAGATTGTAAATGATAATTATCTATATGCTAAAGTTGTAAAATTTACTGAAGATAAATCAAAGTTGTCTGAGGACAAAATCCCAGGCTTAACAGACATAGTTGGAGATGAAGATAAGGCAAAGGAGATTGTGGAAGCTGCCAAGGCATCCATGGGACAGGATTTGTCTCCGGTGGATTTGATTAACGTCCAGCAATTTGCACAGAGGGTAATGGACCTCTCTGAGTATAGAAGAAAGCTCTATGACTATCTTGTTACTAAGATGAATGATATTGCACCCAATTTGGCCTCATTGATCGGTGAAGTTGTTGGTGCACGGTTGATTTCCCATGCTGGTAGCCTCACAAACTTGGCTAAGTGCCCCTCTTCTACTCTTCAAATTCTTGGTGCAGAGAAGGCTTTGTTCAGGGCTTTGAAAACCAGAGGAAATACTCCCAAATATGGCCTGATATTCCATTCATCTTTTATTGGTCGAGCATCTGCCAGAAACAAGGGTCGAATGGCTCGATATCTTGCAAACAAGTGTTCAATTGCATCCCGCATTGACTGCTTTTCTGAAATGGGTTCTACTACTTTTGGAGAAAAACTCCGTGAACAAGTTGAGGAGCGACTTGACTTTTATGACAAGGGAGTTGCCCCTCGTAAGAACATTGATGTCATGAAGGCGGCTATTGAGAGTGCTCAAAATAAAGACACTGATATGGAAACAGAAGTGTCTGTTAAAGTTTCAGGCAAGAAAGGCAAGAAGAAGCCAAAAGCTGCTGCTGCTGCAGATGAAGGTGAGGTCATGGCTATAGATAAGCCCACAGCAATTACAAATGGTGAAGCATTAGATAAATCAGAGAAGAAAAAGAAAAAGAAAGAAAAGAGGAAATTGGACCAGGAGAGGGAGCTGCGAGATATTGCTGTTTATGATGGTGCCAAGGGGGTTGATGATGTGCAAAATGGAGTAGTTAAAAAGAAGAAGAAGGATAAAAAGCATGATGATGATGGGGAAGTCCTGGAGGCTGCTACTGAGACAAAGAAGAAAAAGAAGAAAAAATCGAAAATGGAAGCTCCTAATTCGGCGGCTTGTGTTTCAAACACATCGGATGGTCCGAACTCCGAGGCCCGAGAAGGCGAGAAGCGAGCAACCTTTCTTCCTCCCGTCTCTTTCAGACGCAACGCGCAAGCGTGA 1839 0.4318 MGRNCWLTISISRFHSSMALYLLYESASGYALCHARGLDEIGQNTEAVRNSVSDLNRFGKVVQLTAFSPFQSALDALKQCNSVSEGLLTDELRTFLEINLPKGKEGKKPKFSLGVADPKIGSQISEVTKIPCQSNEFVGELLRGVRLHFDRFINDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYAKVVKFTEDKSKLSEDKIPGLTDIVGDEDKAKEIVEAAKASMGQDLSPVDLINVQQFAQRVMDLSEYRRKLYDYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFSEMGSTTFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAIESAQNKDTDMETEVSVKVSGKKGKKKPKAAAAADEGEVMAIDKPTAITNGEALDKSEKKKKKKEKRKLDQERELRDIAVYDGAKGVDDVQNGVVKKKKKDKKHDDDGEVLEAATETKKKKKKKSKMEAPNSAACVSNTSDGPNSEAREGEKRATFLPPVSFRRNAQA 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0572 612 FunFam Nucleolar protein 56 157 315 - -
Glsi02g0572 612 SMART NOSIC_2 187 239 IPR012976 -
Glsi02g0572 612 Pfam NOP5NT (NUC127) domain 21 86 IPR012974 -
Glsi02g0572 612 MobiDBLite consensus disorder prediction 451 465 - -
Glsi02g0572 612 Gene3D Nop domain 316 439 IPR042239 -
Glsi02g0572 612 Gene3D - 158 315 - -
Glsi02g0572 612 Pfam snoRNA binding domain, fibrillarin 194 426 IPR002687 -
Glsi02g0572 612 MobiDBLite consensus disorder prediction 497 527 - -
Glsi02g0572 612 FunFam Nucleolar protein 56 316 428 - -
Glsi02g0572 612 Coils Coil 498 518 - -
Glsi02g0572 612 ProSiteProfiles Nop domain profile. 312 430 IPR002687 -
Glsi02g0572 612 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 20 568 IPR045056 GO:0030515|GO:0031428|GO:0032040
Glsi02g0572 612 MobiDBLite consensus disorder prediction 451 612 - -
Glsi02g0572 612 MobiDBLite consensus disorder prediction 535 562 - -
Glsi02g0572 612 SUPERFAMILY Nop domain 180 429 IPR036070 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0572 Glsi-ChrGlsi02 3691952 3698951 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0572 02 3691952 3698951 Glsi02g0572 02 3691952 3698951 ECH