Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0555 ATGAATAACCTCACCATAGTCGTCCAAGTTTCGGAAAGGTCCAAAAGTCAACGAATTAAGATCAAAATCTCCAGCTTGTCAGCATTCGAATTATACAGAGAGATAGAGATAAGCCAGAAAGAAGAAATTGTTATGGAGGCCATGGGAGAGAGTCCACGGAGCCCAGAGGCGAAGCTGGGGATGCGAGTGGAGGATCTGTGGGACGTGCAGGAGCCAAAGCTAAGTCCTAATGAGAAGCTCAACGCTTGCTTTGAAAGCATCCCCGTGTCTGCTTTCCCTCCATCTCCTTCAAACCAAGTGATTGAGATAAAATCGGACGCCACCCTAGCGGAAGCTGTTGAAATACTGGCTCACAACAATATTCTGAGCGCACCTGTGGTGGATGTTGAAGCACCTGAAGATGCCAGTTGGATTGACAGATATATCGGAATAGTTGAGTTTGCAGGAATTGTTGTATGGATTCTGCATCAGTCTGAACCTCCATCTCCTAGGAGTCCATCGACTCCATCCAGTGGATGTAATATTGCAACTGCAGCTAATGGATTGACTTCTGCTCCAGAACTTGAGGGCTTAGGCCTTGGATCTGCTGCAACAACTTCAGGCAACTTTTTTGAGGATCTGACTTCTTCTGAATTTTATAAGAGTACCAAGGTTTGTGATATTTCAGGGTCATTCCGCTGGGCCCCATTTCTTGCTTTGCAGAGATCAAACTCATTTCTCACCATGCTCTTGCTGCTTTCAAAGTACAATATGAAGAGCATTCCCGTGGTAGATTTGGGTGCAGGAAGAATTGACAATGTTATTACACAGTCTGCCGTTATTCATATGTTGGCTGAGTGTGCGGGGCTTCAGTGGTTTGAGAGTTGGGGTACCAAGAAACTATCTGAAGTTGGTCTACCTGTGATGACACCCGATCATATCATCAAGGTTTTTGAGGATGAACCGGTGCTTCAAGCATTTAAACTGATGAGGAAAAAGAGAATTGGAGGGGTACCCGTAATCGAAAGGGGTAGCAGCAGGGCTGTGGGTAACATAAGCCTACGGGATGTTCAATTCTTGCTAACTGCTCCAGAAATTTACCATGATTATAGAGCTATTACAGTAAGAGACTTCCTGACAGCTGTTAGAAGCTACTTAGAGAAGCATAAAGAGGCCTTCCCGAGGTCAAGTGATTTGGTAACATGCAAAAAGGATTGCACAATCAAAGAATTGATTCAATTGCTTGACCATGAGAAGATTCATCGGATCTATGTTGTAAATGATGATGGGAATCTGGAAGGAGTGATCACACTCAGAGATATAATCTCAAAGCTAGTACATGAGCCCCGTGGCTATTTTGGTGATTTCTTTGATGGTGTTCTCCCCTTGCCTTCAAACAGCAGGGTTTAA 1389 0.4435 MNNLTIVVQVSERSKSQRIKIKISSLSAFELYREIEISQKEEIVMEAMGESPRSPEAKLGMRVEDLWDVQEPKLSPNEKLNACFESIPVSAFPPSPSNQVIEIKSDATLAEAVEILAHNNILSAPVVDVEAPEDASWIDRYIGIVEFAGIVVWILHQSEPPSPRSPSTPSSGCNIATAANGLTSAPELEGLGLGSAATTSGNFFEDLTSSEFYKSTKVCDISGSFRWAPFLALQRSNSFLTMLLLLSKYNMKSIPVVDLGAGRIDNVITQSAVIHMLAECAGLQWFESWGTKKLSEVGLPVMTPDHIIKVFEDEPVLQAFKLMRKKRIGGVPVIERGSSRAVGNISLRDVQFLLTAPEIYHDYRAITVRDFLTAVRSYLEKHKEAFPRSSDLVTCKKDCTIKELIQLLDHEKIHRIYVVNDDGNLEGVITLRDIISKLVHEPRGYFGDFFDGVLPLPSNSRV 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0555 462 CDD CBS_pair_SF 305 435 - -
Glsi02g0555 462 ProSiteProfiles CBS domain profile. 388 446 IPR000644 -
Glsi02g0555 462 SUPERFAMILY CBS-domain pair 301 448 IPR046342 -
Glsi02g0555 462 CDD CBS_pair_SF 243 350 - -
Glsi02g0555 462 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 81 439 - -
Glsi02g0555 462 Pfam CBS domain 301 350 IPR000644 -
Glsi02g0555 462 Pfam CBS domain 389 439 IPR000644 -
Glsi02g0555 462 Pfam CBS domain 97 146 IPR000644 -
Glsi02g0555 462 Gene3D - 291 441 IPR046342 -
Glsi02g0555 462 ProSiteProfiles CBS domain profile. 302 363 IPR000644 -
Glsi02g0555 462 ProSiteProfiles CBS domain profile. 94 162 IPR000644 -
Glsi02g0555 462 SMART cbs_1 229 278 IPR000644 -
Glsi02g0555 462 SMART cbs_1 99 155 IPR000644 -
Glsi02g0555 462 SMART cbs_1 391 439 IPR000644 -
Glsi02g0555 462 SMART cbs_1 306 355 IPR000644 -
Glsi02g0555 462 SUPERFAMILY CBS-domain pair 78 278 IPR046342 -
Glsi02g0555 462 Gene3D - 79 284 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0555 Glsi-ChrGlsi02 3584056 3587016 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0555 02 3584056 3587016 Glsi02g0555 02 3584056 3587016 ECH