Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0518 ATGAGAGACATAGTGTCTTGTTTTAGCGACAGCAAAGTCAATGTGTTGCATTCCTCTTCTTCTAGCTATTCAAACAATGCTTATATATCTCCAAGCCTCACACCTTCAATCCAAAACTCAGTTTCCTGCATCTACAAAATCACCCTCTCCACCCAGAAGCAGTTCTTGATCACAATCACATGGTGTAAGAACCATTCAAACCAGGGAATCAGTCAGTGTAAACTTCGGCGATGGCGAAGACCTGAAGATCAAGAAATAGGCCTGATGTTGGGTAATATGGCTGAAGAAGCTGTGAATAAGAAGTTGAAAAGTAGCATTTCCATGGCAAAATTCTCACTAATATCACAGCGAGAGCATTGTTCAGGAAATACCCCTTCTACAACAAAGGCTCAGTTCTGGGAAACTGGGACTTGGCATGACATTTTGATAAGATGCAGTGGTAAAAATGATTGGGCAGGTGGTCTCTGTGCCACCTCACCAACAGGCAAACAGGTTCAACAACTACAAGAAGAGCACACACCGATCTCTGAAAAGTCAAAACTCAAAACCTCCATAGAGAGGCAGAAATTCTGTGAATTGTTTAACACTGATCGTACGTTGTTGAAGATCTTTGACTTGTTTGTAATTTATCTGATCAAATCCACTACGATTGAATTTTACGAATTCAAGGGAGAAATTGATAAGCACAAGCCAGAGATCAAAGAGCTGTGGCATACGCGTGGGAGGGATCGGTGGGAACTGCTGCTGGAGAAGAGGTCAACTCAAATGCCGGAAGAAGACTTAGTTGACATAAAGTTTAGGTTGTACGATGGGTCCGATATTGGACCGTTCAGTTACTCATCGACCGCCACGGTTGACATGCTCAAGCAAAGGATTGTGTCTGATTGGCCCAAAGGTAAAACAGTCATCCCAAAGGCAGCAAATGAAGTAAAATTGATTAGCTCTGGTAAAATCTTGGAAAACAACAAAACTGTTGGTCAGTGTAAAGTACCTTTTGGTGAGATTGCTGGGGGAGTTATAATAATGCTTGTTGTTGTACAGCCATCGTTGTCAAAAAATAAAGCTGAAAAGAAGATTGATAATTCACCCAAGAAGATTGTCTGCTCTTGTTCCATAATGTGA 1122 0.4153 MRDIVSCFSDSKVNVLHSSSSSYSNNAYISPSLTPSIQNSVSCIYKITLSTQKQFLITITWCKNHSNQGISQCKLRRWRRPEDQEIGLMLGNMAEEAVNKKLKSSISMAKFSLISQREHCSGNTPSTTKAQFWETGTWHDILIRCSGKNDWAGGLCATSPTGKQVQQLQEEHTPISEKSKLKTSIERQKFCELFNTDRTLLKIFDLFVIYLIKSTTIEFYEFKGEIDKHKPEIKELWHTRGRDRWELLLEKRSTQMPEEDLVDIKFRLYDGSDIGPFSYSSTATVDMLKQRIVSDWPKGKTVIPKAANEVKLISSGKILENNKTVGQCKVPFGEIAGGVIIMLVVVQPSLSKNKAEKKIDNSPKKIVCSCSIM 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0518 373 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 256 372 IPR040015 -
Glsi02g0518 373 Pfam Plant protein of unknown function (DUF868) 83 150 IPR008586 -
Glsi02g0518 373 SUPERFAMILY Ubiquitin-like 256 350 IPR029071 -
Glsi02g0518 373 CDD Ubl_MUBs_plant 261 348 - -
Glsi02g0518 373 Gene3D - 249 355 - -
Glsi02g0518 373 ProSiteProfiles Ubiquitin domain profile. 262 330 IPR000626 GO:0005515
Glsi02g0518 373 Pfam Ubiquitin-2 like Rad60 SUMO-like 261 371 IPR039540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0518 Glsi-ChrGlsi02 3353337 3359040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0518 1 145 EF-hand Containing Proteins AT5G28150 28.788 3.52e-09 55.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0518 02 3353337 3359040 Glsi02g0518 02 3353337 3359040 ECH