Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0479 ATGAACACGCAATCTCGATGGTTCGTCTACCCCATGTGTGGACTGGTGAACTCATTTTTTGGGCTGAACATTAAAGCACGCACCAAATTTTCCAATTTTGGCATAGCACAATCTCAATTGACAGATTTGGAAGTAGAGGCCAAATACTTCTTTGTCATCATCCTCTTATACTCGCTTCTCTCTGCAAAACAAGAGGTTCGAAGAATGGAGGCATCCAAAGAATATGAACTGGGCGTGGCGGAAAACAGCACTGAAGAGATGACTAAGATTCCTCTCATGAGAGCTTTTGTTGAGAGCAAGAATCCCTCCGCTAAGGAAGAAGATGATTTCATGATTAGAAGATTCTTGCGTGCTCGTAATTTAGATATAGAGAAGGCTTCGGCAATGTTCCTCAAGTATTTGAAATGGAGACGATCATTTGTTCCAAATGGGTCTATATCCCCGTCAGAGATTCCTAATGAACTAGCACAGAAAAAGGTGTTCATGCAAGGACTCGGTAAGAAAGGACGACCCATAGCAATTGCCTTCGGTGCTAGACATTTTCAGAACAAAGATGGTGTGGATGAACTTAAACGATTGGTAATCTATAGTCTTGATAAACTCTGTTCAAGGATGCCCCCGGGACAAGAAAAGTTTGTAGGTATAGTAGATCTTAAGGGATGGAGATACTCAAACAGTGACATTCGCGGATACCTTGCGATTCTAACCATTTTGCAGGACTACTATCCAGAAAGACTGGGGAAGTTGTTTATTGTGCATGCATCCTCCATATTTATGACAGTATGGAAGACAATTTACCCTTTCATTGACGACAACACCAAGAAGAAGATAGTGTTTGCGGAGACTAATAAGATCAAATCAACACTGCTGGAAGAAATCGACGAGAGTCAGATCCCAGAGATATACGGGGGCCAACTTCCATTAGTTCCGATCCAGGATAGCTAA 945 0.4201 MNTQSRWFVYPMCGLVNSFFGLNIKARTKFSNFGIAQSQLTDLEVEAKYFFVIILLYSLLSAKQEVRRMEASKEYELGVAENSTEEMTKIPLMRAFVESKNPSAKEEDDFMIRRFLRARNLDIEKASAMFLKYLKWRRSFVPNGSISPSEIPNELAQKKVFMQGLGKKGRPIAIAFGARHFQNKDGVDELKRLVIYSLDKLCSRMPPGQEKFVGIVDLKGWRYSNSDIRGYLAILTILQDYYPERLGKLFIVHASSIFMTVWKTIYPFIDDNTKKKIVFAETNKIKSTLLEEIDESQIPEIYGGQLPLVPIQDS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0479 314 Pfam CRAL/TRIO domain 157 304 IPR001251 -
Glsi02g0479 314 Gene3D - 57 313 IPR036865 -
Glsi02g0479 314 PANTHER OS03G0850700 PROTEIN 81 313 - -
Glsi02g0479 314 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 148 310 IPR001251 -
Glsi02g0479 314 SUPERFAMILY CRAL/TRIO domain 149 307 IPR036865 -
Glsi02g0479 314 SMART CRAL_TRIO_N_2 108 133 IPR011074 -
Glsi02g0479 314 SUPERFAMILY CRAL/TRIO N-terminal domain 81 143 IPR036273 -
Glsi02g0479 314 SMART sec14_4 154 307 IPR001251 -
Glsi02g0479 314 CDD SEC14 160 305 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0479 Glsi-ChrGlsi02 3056212 3058069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0479 114 300 Acyl Lipid Metabolism Gene Families AT5G47730 27.941 5.35e-13 67.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0479 02 3056212 3058069 Glsi02g0479 02 3056212 3058069 ECH