Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0476 ATGAGCTATAAATATTCGGGAATAAAAATGGATGGTAATGGGACAAGCATGAAGAGAACGATTTTGCATGATCTCTACGAGAAGCAAAGGCAGAGCCCTTATTATGACAATCTTTGCCGCCCCGTTACTGATTTGCTTCCATTGATTGCAAGAGGAATCAGAGGTGTCACCAGCAATCCGGCGATTTTCGAAAAAGCTATATCATCATCAAGTGCTTACAACGAGCAATTGAGGGAGTTGGTAAAGGCAGGGAAAAACATAGAAAATGCCTACTGGGAATTGGTTGTGAAGGACATACAGGATACTTGCAAACTCTTGGAGCCTATTTACAACGAAAAAGATGGGATAGATGGGTTTGTGTCTGTCCCAGTTTCCCCCAGGCTTGCAGATGATACTAAAGGAACAACTGAGGCAGCAAAATGGCTCCATAAAATGGTTGGATGTCCTAATGTTTATATTAAAATTCCTGCAACAGAAGAATCCATCCCTTCTATAAAGGAGGTCATATCTCGGGGTACAAGTGTTAATGTCACTCTCATATTCTCTCTCCCGAGATATGAAGCAGTAATTGATGCTTACTTGGATGGACTTGAAACTTCTTCAATGACTGATCTTTCTAAGGTTAGAAGTGCTGGAGCTTTCTACATCAGTAGAGTAGATGTTGTAATTGACAAAAAACTTGAGGAGATTGGTACTGTCGAGGCTCTTGATCTAAGAGGAAAGGCTGCAGTTGCTCAAGCGGTCTTAGCTTACCAGCTTTTCCAGAAGAAGTTTTCTGGTCCACGGTGGGAGCGTCTGGAGAAGAGAGGTGCCAAGAAACAGAGGCTGATGTGGGCCTCAACAAATGTGAAAAATGCAGCTTACTCTGACACCTTATATGTGGCTTCTCTTATTGGACCAGATACGATTTCAACCATACCAGAGCAAGCTCTTCAAGCATTTATGGACCATGGTACTGTTGCAAGAACCATTGATGCAAAAGTACCAGAGGCCCAAGGCATCTACGATGCAATTGAGAAGTTGGGAATTGATTGGAATTCTGTTGGATCACAACTAGAACATGAGGTGCTGGGTTCTTTCACAAAAAGCTTTGACAAGGTGCTTGAGTGCCTGCAAAAGAAGGCTAAGTCTAGTGAATTCATCATCCTACACAAGCCAATTGTGCAGCTCCACATTCACACGTCCTCTCTATTTCTCTTATCTTCTTCGTCTCTTTCTTCGGTTTCCCTACTTCTGTATCTGTGA 1245 0.4257 MSYKYSGIKMDGNGTSMKRTILHDLYEKQRQSPYYDNLCRPVTDLLPLIARGIRGVTSNPAIFEKAISSSSAYNEQLRELVKAGKNIENAYWELVVKDIQDTCKLLEPIYNEKDGIDGFVSVPVSPRLADDTKGTTEAAKWLHKMVGCPNVYIKIPATEESIPSIKEVISRGTSVNVTLIFSLPRYEAVIDAYLDGLETSSMTDLSKVRSAGAFYISRVDVVIDKKLEEIGTVEALDLRGKAAVAQAVLAYQLFQKKFSGPRWERLEKRGAKKQRLMWASTNVKNAAYSDTLYVASLIGPDTISTIPEQALQAFMDHGTVARTIDAKVPEAQGIYDAIEKLGIDWNSVGSQLEHEVLGSFTKSFDKVLECLQKKAKSSEFIILHKPIVQLHIHTSSLFLLSSSSLSSVSLLLYL 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0476 414 PANTHER TRANSALDOLASE 38 374 IPR001585 GO:0005975
Glsi02g0476 414 CDD Transaldolase_like 32 366 IPR004732 GO:0004801|GO:0005737|GO:0006098
Glsi02g0476 414 Hamap Transaldolase [tal]. 1 381 IPR004732 GO:0004801|GO:0005737|GO:0006098
Glsi02g0476 414 NCBIfam transaldolase 44 369 IPR004732 GO:0004801|GO:0005737|GO:0006098
Glsi02g0476 414 ProSitePatterns Transaldolase signature 1. 55 63 IPR018225 GO:0005975
Glsi02g0476 414 PIRSF Trnald_Bac_Plnt 11 381 IPR004732 GO:0004801|GO:0005737|GO:0006098
Glsi02g0476 414 Gene3D Aldolase class I 20 376 IPR013785 -
Glsi02g0476 414 Pfam Transaldolase/Fructose-6-phosphate aldolase 50 369 IPR001585 GO:0005975
Glsi02g0476 414 SUPERFAMILY Aldolase 29 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0476 Glsi-ChrGlsi02 3038851 3042759 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0476 02 3038851 3042759 Glsi02g0476 02 3038851 3042759 ECH