Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0458 ATGGGACCAGATGAGGTGAAAGGAGGTTCTGCAGATCTTCATCATCGTGAATCAGATATAGAACTCATTGGAGGTGAGAGGGTAGCTCATAGTGGACCTCTGAACAAAAGGGTTGGGAGAAAGAGTGCCAAGTTCAGTGTTCCTGAGTCCAGTGCCGGCATTGATGTTGGGAATAGTAGTGGCACCAAATCCCACGATGAAGACGAGGCAGCCTACGTGGAGGTCACTATGGATATACAAGGTGATTCTGTTGCTTTACACAGCGTTAAAACTGTTGCCGGCGGTGATCTAGGAGAAGACGAGAGACGGGGTTTGCTTGGGAAAGGCCTCGAGAAGAAAACCTCCTTTGGTGCTTCACTTGTGCGAAATGCTTCTATTACTGTGAGGCATGTGTCTCAGGAACTGAAGCGTTTCGCTTCCTTTTCAAAACCGGCAGCACCAGGAAAACACTATGATAGGACTAAGTCTGCGGCGTTTCATGCTCTGAAGGGACTCAAGTTCATCAGTAAGACCGATGTCGGTACAGGATGGGACGAGGTTGAGAAGCAATTTGACATGCTCACTGCTACCACTGATGGGTATCTTCCTCGTTCTCTGTTTGGAAAATGTATAGGAATGAACAAGGAATCAGAGGCGTTTGCAGTGGAGCTCTTTGATGCTCTTTCTCGTCAGAGAGGGATTCAGGGGGATTCCATTAACAAGGCCCACTTGAAGGATTTTTGGGAGCAGATTGCTGACCAGAGCTTCGACTCTAGGCTTAAAACATTCTTCGACATGGTCGATAAAGATGCAGATGGCAGAATCACCGAGGAAGAAATCAAAGAGATTATCTGCCTTAGCGCCACTACCAACAAACTCTCAATTATCAAGAAACAAGCGGAGGAGTATGCGGCTTTGATCATGGAAGAACTAGACCCAGACGACACCGGATTTATCATGATAGACAACCTGGAGATGCTGTTATTGCATGGACCCAACCATTCCAAAAGAGGAGATAGCAAGTACCTGAGCCAAATGCTAAGCCAAAAGCTTAAGCCCACTTATGACCACAATCCTATTAGTAGGTGGTATAAAGATACCAGATACTTCTTTGAGGATAATTGGCAGAGAACTTGGGTATTGGCACTGTGGATTGGGGTGATGGCAGGTCTATTTGCTTACAAGTTCGTCCAGTATCGGAGAAGAGCTGCATATGAGGTAATGGGACATTGTGTGTGCATGGCCAAAGGAGCTGCTGAGACACTAAAGCTGAACATGGCTCTTATTTTGTTACCTGTTTGCCGAAACACCATCACCTGGATCAGGAATAAGACCGGGCTAGGTGTTATGGTTCCTTTTGATGACAACCTTAACTTCCACAAGGTGATAGCTGTGGCAGTAGCAATTGGTGTTGGTATACATGCTATTTATCATCTTACTTGTGATTTCCCACGCCTTCTTCATGCAAGTGCTGAAAAGTACAAGCTTATGGAGCCATTTTTCGGACATAAACCTTCTAGTTATTGGTATTTTGTCAAATCATGGGAAGGAGTAACAGGGATTATAATGGTAGTGCTAATGGCAATAGCCTTCACTCTGGCCACCCCTTCGTTCAGGAGAGGCAGGGTCAAGCTACCCGGACTCCTCAAGAAGCTCACTGGTTTCAATGCCTTTTGGTATTCCCATCACCTCTTCGTCATTGTCTATGCCCTGTTGATAGTGCATGGAATCAAACTTTACTTGACTACTGAATGGGACAAGAAAACGACCTGGATGTATTTGGCTATTCCTATCACCATTTATGCATTGGAAAGATTGATTAGAGCACTCAGATCAAGCATCAAGCCTGTGAGAATAGTAAAGGTGGCTGTTTATCCTGGAAATGTGTTAGCACTTCATATGTCAAAGCCTCATGGGTTTAGATACAGAAGCGGGCAATTCATGTTTGTCAATTGTGCCGCCGTGTCTCCATTTGAATGGCATCCATTCTCCATAGTCTCAGCCCCAGGTGATGACTACCTTAGCGTTCATATTCGAAAAGCAGGTGATTGGACCCGGAGCATTATAGAAAAATTCTCACAGGCTTGCCAGCCACCCCCCGATGGGAAGAGTGGACTTCTAAGAGCTGAATGCTTGCAAGGAGATAACAGTCCAAGTGCTCTTCCTAAAGTTTTGATTGATGGTCCATACGGAGCGCCAGCTCAAGACTACAAAAAGTATGAGGTAGTTTTGCTTGTGGGATTGGGAATTGGAGCTACCCCAATGATCAGCATACTTAAGGACATAGTGAATAACTTCAAGGCCATGGAAGAAGAGGAGGGGATGGCGTTAGAGGAAGGAGTAAGTGGGGTTGGTGGAAAATTACCCCAACAGAGGAAAGCTGGGTTCAGCGACTTCAAAACTAAGAAGGCCTACTTCTACTGGGTGACTAGAGAACAGGGTTCTTTTGACTGGTTCAAAGGAGTAATGAACGAGGTAGCTGAAGCAGACCATCGAGAAGTGATTGAGCTCCACAATTACTGCACCAGCGTCTATGAAGAGGGAGACGCACGCTCTGCTCTTATTGCTATGCTACAATCTCTAAATCATGCTAAGAATGGCGTGGACATCGTCTCTGGGACGCGCGTCAAGTCTCACTTTGCCAAACCCAATTGGCGCAGTGTCTACAAGCGCATTGCACTTACTCATCCTCAAGCCAGGGTTGGGGTGTTTTACTGTGGACCACCCGCACTCACCTTACAGCTTCGTCAACTAGCTTCGGATTTCTCTCACAAGACAACCACTAAATTCGACTTCCATAAAGAAAATTTCTGA 2793 0.4586 MGPDEVKGGSADLHHRESDIELIGGERVAHSGPLNKRVGRKSAKFSVPESSAGIDVGNSSGTKSHDEDEAAYVEVTMDIQGDSVALHSVKTVAGGDLGEDERRGLLGKGLEKKTSFGASLVRNASITVRHVSQELKRFASFSKPAAPGKHYDRTKSAAFHALKGLKFISKTDVGTGWDEVEKQFDMLTATTDGYLPRSLFGKCIGMNKESEAFAVELFDALSRQRGIQGDSINKAHLKDFWEQIADQSFDSRLKTFFDMVDKDADGRITEEEIKEIICLSATTNKLSIIKKQAEEYAALIMEELDPDDTGFIMIDNLEMLLLHGPNHSKRGDSKYLSQMLSQKLKPTYDHNPISRWYKDTRYFFEDNWQRTWVLALWIGVMAGLFAYKFVQYRRRAAYEVMGHCVCMAKGAAETLKLNMALILLPVCRNTITWIRNKTGLGVMVPFDDNLNFHKVIAVAVAIGVGIHAIYHLTCDFPRLLHASAEKYKLMEPFFGHKPSSYWYFVKSWEGVTGIIMVVLMAIAFTLATPSFRRGRVKLPGLLKKLTGFNAFWYSHHLFVIVYALLIVHGIKLYLTTEWDKKTTWMYLAIPITIYALERLIRALRSSIKPVRIVKVAVYPGNVLALHMSKPHGFRYRSGQFMFVNCAAVSPFEWHPFSIVSAPGDDYLSVHIRKAGDWTRSIIEKFSQACQPPPDGKSGLLRAECLQGDNSPSALPKVLIDGPYGAPAQDYKKYEVVLLVGLGIGATPMISILKDIVNNFKAMEEEEGMALEEGVSGVGGKLPQQRKAGFSDFKTKKAYFYWVTREQGSFDWFKGVMNEVAEADHREVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDIVSGTRVKSHFAKPNWRSVYKRIALTHPQARVGVFYCGPPALTLQLRQLASDFSHKTTTKFDFHKENF 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0458 930 Pfam FAD-binding domain 609 726 IPR013112 GO:0016491
Glsi02g0458 930 Gene3D - 724 930 IPR039261 -
Glsi02g0458 930 SUPERFAMILY Riboflavin synthase domain-like 609 726 IPR017938 -
Glsi02g0458 930 Gene3D Translation factors 596 690 - -
Glsi02g0458 930 PANTHER NADPH OXIDASE 212 930 - -
Glsi02g0458 930 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 605 729 IPR017927 GO:0016491
Glsi02g0458 930 Pfam Ferric reductase like transmembrane component 410 566 IPR013130 -
Glsi02g0458 930 MobiDBLite consensus disorder prediction 1 66 - -
Glsi02g0458 930 SFLD Ferric reductase subgroup (FRE) 369 930 - -
Glsi02g0458 930 FunFam Respiratory burst oxidase homolog A 596 688 - -
Glsi02g0458 930 MobiDBLite consensus disorder prediction 1 24 - -
Glsi02g0458 930 CDD NOX_Duox_like_FAD_NADP 612 930 - -
Glsi02g0458 930 Pfam Ferric reductase NAD binding domain 733 912 IPR013121 GO:0016491
Glsi02g0458 930 ProSitePatterns EF-hand calcium-binding domain. 261 273 IPR018247 -
Glsi02g0458 930 PRINTS Cytochrome B-245 heavy chain signature 456 474 IPR000778 GO:0016020|GO:0016491
Glsi02g0458 930 PRINTS Cytochrome B-245 heavy chain signature 738 755 IPR000778 GO:0016020|GO:0016491
Glsi02g0458 930 PRINTS Cytochrome B-245 heavy chain signature 715 728 IPR000778 GO:0016020|GO:0016491
Glsi02g0458 930 PRINTS Cytochrome B-245 heavy chain signature 548 568 IPR000778 GO:0016020|GO:0016491
Glsi02g0458 930 ProSiteProfiles EF-hand calcium-binding domain profile. 248 283 IPR002048 GO:0005509
Glsi02g0458 930 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 730 930 IPR039261 -
Glsi02g0458 930 SUPERFAMILY EF-hand 177 326 IPR011992 -
Glsi02g0458 930 SFLD Ferric Reductase Domain 368 760 - -
Glsi02g0458 930 SFLD NADPH oxidase subgroup (NOX) 148 930 - -
Glsi02g0458 930 FunFam Respiratory burst oxidase homolog A 151 269 - -
Glsi02g0458 930 Gene3D - 151 269 - -
Glsi02g0458 930 Pfam Respiratory burst NADPH oxidase 151 251 IPR013623 GO:0004601|GO:0050664
Glsi02g0458 930 FunFam Respiratory burst oxidase protein A 724 930 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0458 Glsi-ChrGlsi02 2953256 2957721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0458 6 930 Miscellaneous Gene Families AT5G47910 62.741 0.0 1191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0458 02 2953256 2957721 Glsi02g0458 02 2953256 2957721 ECH